RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 FAM71DQ8N9W8 422 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 NETO2Q8NC67 525 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 THTPAQ9BU02 230 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 NMUR2Q9GZQ4 415 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 PYGBP11216 843 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 UNGP13051 313 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 KLRC2P26717 231 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 OGDHQ02218 1023 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 DMP1Q13316 513 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 HIF1AQ16665 826 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 EML3Q32P44 896 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 WDR44Q5JSH3 913 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 FOXB2Q5VYV0 432 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 POU5F2Q8N7G0 328 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 TSSK1BQ9BXA7 367 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM8AQ9HCN3 771 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 LIASO43766 372 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 NT5C2P49902 561 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CACNA2D1P54289 1103 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 KLF1Q13351 362 aaPredicted RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CCNG2Q16589 344 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 MTERF2Q49AM1 385 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CFAP157Q5JU67 520 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 RASIP1Q5U651 963 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 RILPQ96NA2 401 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 ACSS2Q9NR19 701 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 LRRC42Q9Y546 428 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 DNALI1O14645 258 aaPredicted RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 GSC2O15499 205 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 LPXNO60711 386 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 PGM1P36871 562 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CRY2Q49AN0 593 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 NPNTQ6UXI9 565 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 HSPH1Q92598 858 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 TRIM4Q9C037 500 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CYP4F11Q9HBI6 524 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.32
HSPG2-211ENST00000486901 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.32
HSPG2-211ENST00000486901 CLUHO75153 1309 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 CCNE2O96020 404 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 EPHB1P54762 984 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 ARL4CP56559 192 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 MRPS9P82933 396 aaKnown RBP13.02□□□□□ -0.33
HSPG2-211ENST00000486901 FAAP100Q0VG06 881 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 WDR78Q5VTH9 848 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 ARID3BQ8IVW6 561 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-211ENST00000486901 TMEM161BQ8NDZ6 487 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 ACTL9Q8TC94 416 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 SERAC1Q96JX3 654 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 MMP19Q99542 508 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
HSPG2-211ENST00000486901 TXNDC9O14530 226 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 UGT1A9O60656 530 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 LRRC74BQ6ZQY2 392 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CENPUQ71F23 418 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 PPM1NQ8N819 430 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 RBBP8NLQ8NC74 664 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 OR5B17Q8NGF7 314 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 TCHPQ9BT92 498 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 UGT1A7Q9HAW7 530 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 UGT1A10Q9HAW8 530 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 UGT1A8Q9HAW9 530 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SEPT9Q9UHD8 586 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 ASTN2O75129 1339 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CDK5RAP2Q96SN8 1893 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 ARHGAP42A6NI28 874 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CST8O60676 142 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SNUPNO95149 360 aaKnown RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 MT-ND3P03897 115 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CD19P15391 556 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 GTF2H1P32780 548 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CYP24A1Q07973 514 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 RAB6CQ53S08 254 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 TDRD10Q5VZ19 366 aaKnown RBP13.01□□□□□ -0.33
HSPG2-211ENST00000486901 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 CDHR3Q6ZTQ4 885 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 ANO5Q75V66 913 aa13.01□□□□□ -0.33
HSPG2-211ENST00000486901 GRAMD1AQ96CP6 724 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms