RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CLUL1Q15846 466 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 RASIP1Q5U651 963 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 OR52E8Q6IFG1 317 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 PPP1R21Q6ZMI0 780 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 RFX8Q6ZV50 586 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 C12orf65Q9H3J6 166 aaKnown RBP10.7□□□□□ -0.7
COMMD4-203ENST00000480484 DCLRE1BQ9H816 532 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 KDM3AQ9Y4C1 1321 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 TRIM64CA6NLI5 447 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 CLDN3O15551 220 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 TGFB1I1O43294 461 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 TTC4O95801 387 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 NDUFB10O96000 172 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 GH2P01242 217 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 ZCCHC18P0CG32 403 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 T-ENOLP0DO92 83 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 RPL13P26373 211 aaKnown RBP10.7□□□□□ -0.7
COMMD4-203ENST00000480484 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
COMMD4-203ENST00000480484 VHLP40337 213 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 PSMC4P43686 418 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 FOXB2Q5VYV0 432 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 IRGCQ6NXR0 463 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 CPXCR1Q8N123 301 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 ZNF333Q96JL9 665 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
COMMD4-203ENST00000480484 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 WDR90Q96KV7 1748 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
COMMD4-203ENST00000480484 MIF4GDA9UHW6 222 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 FOXN3O00409 490 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 DCTN3O75935 186 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 KRT36O76013 467 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 MARK3P27448 753 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 TSPAN7P41732 249 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ITGA8P53708 1063 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 WDR4P57081 412 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 CDR2Q01850 454 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SGO2Q562F6 1265 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 CYFIP1Q7L576 1253 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SLC13A5Q86YT5 568 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ZFAND2BQ8WV99 257 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SNRNP27Q8WVK2 155 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 MAIP1Q8WWC4 291 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 STK33Q9BYT3 514 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 TRIM55Q9BYV6 548 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ZFP69BQ9UJL9 534 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 TRAF3IP3Q9Y228 551 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 LRCH1Q9Y2L9 728 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 FAM47DPA6NHR8 397 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 CAPN9O14815 690 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 TP73O15350 636 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SNX2O60749 519 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 HOXA7P31268 230 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ADCY8P40145 1251 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ECE1P42892 770 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 EPHB1P54762 984 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 WASHC2DQ5SRD0 308 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 FAM186BQ8IYM0 893 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 C4orf33Q8N1A6 199 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 OGFOD1Q8N543 542 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ENDOVQ8N8Q3 282 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 INPP5DQ92835 1189 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 RBM41Q96IZ5 413 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 PRMT6Q96LA8 375 aaPredicted RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 PI4KBQ9UBF8 816 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 YARSP54577 528 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ABCB5Q2M3G0 1257 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 MFSD4BQ5TF39 518 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 MTDHQ86UE4 582 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 RHOT2Q8IXI1 618 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SCYL3Q8IZE3 742 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 ANKRD35Q8N283 1001 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 PXYLP1Q8TE99 480 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 RELTQ969Z4 430 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 UBE2OQ9C0C9 1292 aaKnown RBP10.69□□□□□ -0.7
COMMD4-203ENST00000480484 NPHS2Q9NP85 383 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 PCDHGB3Q9Y5G1 929 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 NUMBLQ9Y6R0 609 aa10.69□□□□□ -0.7
COMMD4-203ENST00000480484 USP34Q70CQ2 3546 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 ZMYM2Q9UBW7 1377 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 POC1B-GALNT4F8VUJ3 575 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 PDXKO00764 312 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 KRT15P19012 456 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 SPIRE1Q08AE8 756 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 ARHGEF19Q8IW93 802 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 ZC3H3Q8IXZ2 948 aaKnown RBP10.68□□□□□ -0.7
COMMD4-203ENST00000480484 FAM81AQ8TBF8 368 aa10.68□□□□□ -0.7
COMMD4-203ENST00000480484 LENG9Q96B70 501 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms