RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TTC26A0AVF1 554 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 LNP1A1A4G5 178 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 LACTBL1A8MY62 500 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 FAM189A1O60320 539 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 RNF40O75150 1001 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 PLA2G2AP14555 144 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 LRPAP1P30533 357 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 GPR15P49685 360 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 NOVA1P51513 510 aaKnown RBP10.63□□□□□ -0.71
COL4A5-204ENST00000477429 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 FOXC1Q12948 553 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 E2F4Q16254 413 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 ITPRIPL2Q3MIP1 535 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 ARHGAP29Q52LW3 1261 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 RNF43Q68DV7 783 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 C1orf186Q6ZWK4 172 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 APPL2Q8NEU8 664 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 GIPC2Q8TF65 315 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 DDX1Q92499 740 aaKnown RBP10.63□□□□□ -0.71
COL4A5-204ENST00000477429 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-204ENST00000477429 E2F7Q96AV8 911 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 MSANTD3Q96H12 275 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 LOXL4Q96JB6 756 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 TCHPQ9BT92 498 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 MMTAG2Q9BU76 263 aaKnown RBP10.63□□□□□ -0.71
COL4A5-204ENST00000477429 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 GPR88Q9GZN0 384 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 EBF3Q9H4W6 596 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 MAFFQ9ULX9 164 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 CELSR3Q9NYQ7 3312 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 NUP210Q8TEM1 1887 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-204ENST00000477429 CACNA1EQ15878 2313 aa10.63□□□□□ -0.71
COL4A5-204ENST00000477429 CITO14578 2027 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 NPHP3-ACAD11A0A0J9YXS1 232 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 CDX4O14627 284 aaPredicted RBP10.62□□□□□ -0.71
COL4A5-204ENST00000477429 TRDMT1O14717 391 aaKnown RBP10.62□□□□□ -0.71
COL4A5-204ENST00000477429 CCDC192P0DO97 292 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 BCKDHBP21953 392 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 MARCKSP29966 332 aaPredicted RBP10.62□□□□□ -0.71
COL4A5-204ENST00000477429 TOB1P50616 345 aaPredicted RBP10.62□□□□□ -0.71
COL4A5-204ENST00000477429 GALK1P51570 392 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 EPHB3P54753 998 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 ZNF252P-AS1Q0IIN9 211 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 PLD1Q13393 1074 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 CCDC142Q17RM4 750 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 SH3PXD2AQ5TCZ1 1133 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 RINT1Q6NUQ1 792 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 ABCA7Q8IZY2 2146 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 WASF1Q92558 559 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 KMT5AQ9NQR1 393 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 VPS45Q9NRW7 570 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 TSC2P49815 1807 aa10.62□□□□□ -0.71
COL4A5-204ENST00000477429 COL12A1Q99715 3063 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 BCLAF3A2AJT9 711 aaKnown RBP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 DPYSL4O14531 572 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 TADA3O75528 432 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 F11P03951 625 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 MAPTP10636 758 aaKnown RBP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 HNRNPLP14866 589 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 HMGA1P17096 107 aaKnown RBP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 ALDH1A3P47895 512 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 CREB5Q02930 508 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 MCL1Q07820 350 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SRSF1Q07955 248 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 MESP2Q0VG99 397 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 NOLC1Q14978 699 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SDHAF4Q5VUM1 108 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 TXNDC8Q6A555 127 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 OVOS1Q6IE37 1185 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SFTPA1Q8IWL2 248 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SYNPOQ8N3V7 929 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 FRMD1Q8N878 549 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 RPLP0P6Q8NHW5 317 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 LRRC15Q8TF66 581 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SEPT5Q99719 369 aaPredicted RBP10.61□□□□□ -0.71
COL4A5-204ENST00000477429 IKZF4Q9H2S9 585 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 TASP1Q9H6P5 420 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 TMLHEQ9NVH6 421 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 SLC8A2Q9UPR5 921 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 GPSM3Q9Y4H4 160 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 PCDHGA5Q9Y5G8 931 aa10.61□□□□□ -0.71
COL4A5-204ENST00000477429 ANK1P16157 1881 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 CCDC163A0A0D9SF12 145 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 OR6C75A6NL08 312 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 ARHGAP6O43182 974 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 EPB41L2O43491 1005 aaKnown RBP10.6□□□□□ -0.71
COL4A5-204ENST00000477429 FOXD2O60548 495 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-204ENST00000477429 TOM1L1O75674 476 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 C1QL1O75973 258 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 CAVIN2O95810 425 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 WEE1P30291 646 aa10.6□□□□□ -0.71
COL4A5-204ENST00000477429 MCM2P49736 904 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms