RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 QDPRP09417 244 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RXRAP19793 462 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 EEF1GP26641 437 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 TLX1P31314 330 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 GARSP41250 739 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 GPR3P46089 330 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 HSPA13P48723 471 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PPP5CP53041 499 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ADARP55265 1226 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 NLRP11P59045 1033 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 STARD6P59095 220 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 EIF3EP60228 445 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 ACTR1AP61163 376 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 KCNJ10P78508 379 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 IFI35P80217 286 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 TAP2Q03519 686 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 KCNH2Q12809 1159 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 NAA30Q147X3 362 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 PPP6R3Q5H9R7 873 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 C1orf53Q5VUE5 145 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 SPECC1LQ69YQ0 1117 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PDZD4Q76G19 769 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 NECAB2Q7Z6G3 386 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ASPGQ86U10 573 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 COMTD1Q86VU5 262 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 CNTROBQ8N137 903 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GLB1L3Q8NCI6 653 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 THAP3Q8WTV1 239 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 KIAA1191Q96A73 305 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 EDC3Q96F86 508 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 SEC16BQ96JE7 1060 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 NSMCE3Q96MG7 304 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GPR62Q9BZJ7 368 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ISCUQ9H1K1 167 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 HIPK3Q9H422 1215 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GDAP2Q9NXN4 497 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ACTR3BQ9P1U1 418 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 MAPRE3Q9UPY8 281 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 CNTLNQ9NXG0 1405 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 H7BY64 318 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 DDX39AO00148 427 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 TPP1O14773 563 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GPR39O43194 453 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ADCY3O60266 1144 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ATP9AO75110 1047 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PTPN2P17706 415 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ATF6P18850 670 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 LONP1P36776 959 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 CCR10P46092 362 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 CRKLP46109 303 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 HAND2P61296 217 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 TRA2BP62995 288 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 STRN3Q13033 797 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 COASYQ13057 564 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 WDR43Q15061 677 aaKnown RBP eCLIP3.68□□□□□ -1.82
UBR3-208ENST00000474426 PPP2R5EQ16537 467 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ATAT1Q5SQI0 421 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ZNF658Q5TYW1 1059 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 MACC1Q6ZN28 852 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PSD4Q8NDX1 1056 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 HSPH1Q92598 858 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 STRA6Q9BX79 667 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ZNF287Q9HBT7 754 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 TLR7Q9NYK1 1049 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 TAS2R3Q9NYW6 316 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 TRIM10Q9UDY6 481 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 DTX4Q9Y2E6 619 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PCDHGA8Q9Y5G5 932 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 SNX9Q9Y5X1 595 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ACEP12821 1306 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ANKRD30AQ9BXX3 1397 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 LOC100653049A0A140TA62 436 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 FAM47E-STBD1D6RA91 191 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 FZD9O00144 591 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PCDH17O14917 1159 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 PFDN1O60925 122 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 KRT34O76011 436 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ITGB3P05106 788 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RHCEP18577 417 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 CTNNA2P26232 953 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 IRS1P35568 1242 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GDI2P50395 445 aaKnown RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 RAC3P60763 192 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RHDQ02161 417 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GOLGA8FQ08AF8 430 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 GOLGA8DPQ0D2H9 430 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ASPHQ12797 758 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RASGRF1Q13972 1273 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 EFR3AQ14156 821 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ALX1Q15699 326 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 DEGS2Q6QHC5 323 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RHOT2Q8IXI1 618 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 DNAAF3Q8N9W5 541 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 TEX47Q8TBZ9 253 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 ASZ1Q8WWH4 475 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RAB7BQ96AH8 199 aa3.68□□□□□ -1.82
UBR3-208ENST00000474426 RPRD1AQ96P16 312 aaPredicted RBP3.68□□□□□ -1.82
UBR3-208ENST00000474426 KCNC2Q96PR1 638 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms