RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 WDR44Q5JSH3 913 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 C1orf220Q5T0J3 134 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 OTOP3Q7RTS5 596 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 SPPL2BQ8TCT7 592 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 ZNF512Q96ME7 567 aaPredicted RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 NECAB3Q96P71 396 aaPredicted RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 DUSP9Q99956 384 aaKnown RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 COL25A1Q9BXS0 654 aaPredicted RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 WDR6Q9NNW5 1121 aaKnown RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 CDH9Q9ULB4 789 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 PCDHB5Q9Y5E4 795 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 INSL5Q9Y5Q6 135 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 SCN1AP35498 2009 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 CLUHO75153 1309 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 GABRDO14764 452 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 N4BP1O75113 896 aaKnown RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 SEC24AO95486 1093 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 POU2F2P09086 479 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 PDGFRBP09619 1106 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 PTPN2P17706 415 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 SP100P23497 879 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 ACAT1P24752 427 aaKnown RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 ERCC5P28715 1186 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 ZP2Q05996 745 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 TWF1Q12792 350 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 TAF12Q16514 161 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 MGAT5BQ3V5L5 792 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 INTS6LQ5JSJ4 861 aaKnown RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 C4orf50Q6ZRC1 276 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 GRASPQ7Z6J2 395 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 SPATA2LQ8IUW3 424 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 FAM114A1Q8IWE2 563 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 TDRD5Q8NAT2 981 aaKnown RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 ATAD1Q8NBU5 361 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 FBXL13Q8NEE6 735 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 FAM200AQ8TCP9 573 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 TAS1R2Q8TE23 839 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 ZNF707Q96C28 371 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 SEPT5Q99719 369 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 RTP3Q9BQQ7 232 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 SYT15Q9BQS2 421 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 XYLT2Q9H1B5 865 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 RAB20Q9NX57 234 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 ABI2Q9NYB9 513 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 HSFX1Q9UBD0 423 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 MAGEC2Q9UBF1 373 aaPredicted RBP14.71□□□□□ -0.05
USF1-205ENST00000473969 CDH22Q9UJ99 828 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 SLC27A5Q9Y2P5 690 aa14.71□□□□□ -0.05
USF1-205ENST00000473969 EYSQ5T1H1 3165 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 UNC80Q8N2C7 3258 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 ASS1P00966 412 aaKnown RBP14.7□□□□□ -0.06
USF1-205ENST00000473969 FSHRP23945 695 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 GBP2P32456 591 aaPredicted RBP14.7□□□□□ -0.06
USF1-205ENST00000473969 NOP14P78316 857 aaKnown RBP14.7□□□□□ -0.06
USF1-205ENST00000473969 VEPH1Q14D04 833 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 DPCR1Q3MIW9 517 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 PABPC1LQ4VXU2 614 aaKnown RBP14.7□□□□□ -0.06
USF1-205ENST00000473969 CYP4A22Q5TCH4 519 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 LIMS2Q7Z4I7 341 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 OSTM1Q86WC4 334 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 KBTBD7Q8WVZ9 684 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 MRPL45Q9BRJ2 306 aaKnown RBP14.7□□□□□ -0.06
USF1-205ENST00000473969 PI4K2AQ9BTU6 479 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
USF1-205ENST00000473969 USTQ9Y2C2 406 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 YIPF1Q9Y548 306 aa14.7□□□□□ -0.06
USF1-205ENST00000473969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.7□□□□□ -0.06
USF1-205ENST00000473969 PLXNA3P51805 1871 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 LOC730098B7Z3J9 87 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 TNFRSF10AO00220 468 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 ZNF197O14709 1029 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 PAPLNO95428 1278 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 LMO2P25791 158 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 MCCD1P59942 119 aaPredicted RBP14.69□□□□□ -0.06
USF1-205ENST00000473969 SPOPLQ6IQ16 392 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 ITIH5Q86UX2 942 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 LRRTM3Q86VH5 581 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 SLC35C1Q96A29 364 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 TNIP3Q96KP6 325 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 CORO1BQ9BR76 489 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 NIF3L1Q9GZT8 377 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 ANO10Q9NW15 660 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.69□□□□□ -0.06
USF1-205ENST00000473969 GTF3C4Q9UKN8 822 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 ASB3Q9Y575 518 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 PRUNE2Q8WUY3 3088 aa14.69□□□□□ -0.06
USF1-205ENST00000473969 TCF20Q9UGU0 1960 aaKnown RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 P4HA2O15460 535 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 RHOP08100 348 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 HAPLN1P10915 354 aaPredicted RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 MTIF2P46199 727 aaKnown RBP14.68□□□□□ -0.06
USF1-205ENST00000473969 RAP1GAPP47736 663 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 FMO5P49326 533 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CDR1P51861 262 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 CDH8P55286 799 aa14.68□□□□□ -0.06
USF1-205ENST00000473969 PSMC1P62191 440 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms