RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CAVIN3Q969G5 261 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
LMNA-208ENST00000448611 UBQLN1Q9UMX0 589 aaKnown RBP18.77■□□□□ 0.6
LMNA-208ENST00000448611 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
LMNA-208ENST00000448611 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 VDRP11473 427 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 KCNE1P15382 129 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 PAK2Q13177 524 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 EIF1ADQ8N9N8 165 aaKnown RBP18.76■□□□□ 0.59
LMNA-208ENST00000448611 SMG8Q8ND04 991 aaKnown RBP18.76■□□□□ 0.59
LMNA-208ENST00000448611 C3orf20Q8ND61 904 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 IFT81Q8WYA0 676 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 WNT8BQ93098 351 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 STRIP2Q9ULQ0 834 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 NFU1Q9UMS0 254 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 IPPQ9Y573 584 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 CDY2AQ9Y6F7 541 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 CENPFP49454 3210 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 TCRBV7S2A1N4TA0A589 114 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 O00370 1275 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 TTI1O43156 1089 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 FKTNO75072 461 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 MICAL2O94851 1124 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 HMGCRP04035 888 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 CCND3P30281 292 aaPredicted RBP18.76■□□□□ 0.59
LMNA-208ENST00000448611 ZNF252P-AS1Q0IIN9 211 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 SIX1Q15475 284 aaPredicted RBP18.76■□□□□ 0.59
LMNA-208ENST00000448611 CNGA2Q16280 664 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 CYP4A22Q5TCH4 519 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 C9orf57Q5W0N0 161 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 SND1Q7KZF4 910 aaKnown RBP eCLIP18.76■□□□□ 0.591e-8■■□□□ 12.8
LMNA-208ENST00000448611 SERINC5Q86VE9 423 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 SEC14L1Q92503 715 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 TSPAN18Q96SJ8 248 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 ST7Q9NRC1 585 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 RNF19AQ9NV58 838 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMNA-208ENST00000448611 KLK14Q9P0G3 267 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 IP6K2Q9UHH9 426 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMNA-208ENST00000448611 TRPV2Q9Y5S1 764 aa18.76■□□□□ 0.59
LMNA-208ENST00000448611 M0QZ92 97 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PSTPIP1O43586 416 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PHF2O75151 1096 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 TAS2R40P59535 323 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 TAP1Q03518 808 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 RHOT1Q8IXI2 618 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 HEXIM2Q96MH2 286 aaKnown RBP18.75■□□□□ 0.59
LMNA-208ENST00000448611 MCEEQ96PE7 176 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PLVAPQ9BX97 442 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PARP2Q9UGN5 583 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 LCMT1Q9UIC8 334 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 SNX9Q9Y5X1 595 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PDCD11Q14690 1871 aaKnown RBP18.75■□□□□ 0.59
LMNA-208ENST00000448611 SCN1AP35498 2009 aa18.75■□□□□ 0.59
LMNA-208ENST00000448611 PIRO00625 290 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 FSCN2O14926 492 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 ASGR1P07306 291 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
LMNA-208ENST00000448611 ELNP15502 786 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 ECHS1P30084 290 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 GSCP56915 257 aaPredicted RBP18.74■□□□□ 0.59
LMNA-208ENST00000448611 OGDHQ02218 1023 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 NNTQ13423 1086 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CYP1B1Q16678 543 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 SGO2Q562F6 1265 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CCSAPQ6IQ19 270 aaPredicted RBP18.74■□□□□ 0.59
LMNA-208ENST00000448611 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 ARRDC4Q8NCT1 418 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 KLHDC9Q8NEP7 349 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.59
LMNA-208ENST00000448611 CPXM1Q96SM3 734 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 MRPL45Q9BRJ2 306 aaKnown RBP18.74■□□□□ 0.59
LMNA-208ENST00000448611 NT5C1AQ9BXI3 368 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 TJP2Q9UDY2 1190 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 KIAA1257Q9ULG3 409 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CD4P01730 458 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 RARAP10276 462 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CYP3A5P20815 502 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CHRNA3P32297 505 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 GPD2P43304 727 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 DR1Q01658 176 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 CUL1Q13616 776 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 RPAINQ86UA6 219 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 RSPH3Q86UC2 560 aa18.74■□□□□ 0.59
LMNA-208ENST00000448611 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
LMNA-208ENST00000448611 H3BQF6 201 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 M0QYV0 167 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 FAM153BP0C7A2 387 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 CST5P28325 142 aaPredicted RBP18.73■□□□□ 0.59
LMNA-208ENST00000448611 DHX34Q14147 1143 aaKnown RBP18.73■□□□□ 0.59
LMNA-208ENST00000448611 KCNA10Q16322 511 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 FAM153CQ494X1 144 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 FAM47CQ5HY64 1035 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
LMNA-208ENST00000448611 DCUN1D2Q6PH85 259 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 LCLAT1Q6UWP7 414 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms