RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SLC4A11Q8NBS3 891 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 TMEM35BQ8NCS4 154 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 WHAMMQ8TF30 809 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 DDX1Q92499 740 aaKnown RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 VCPIP1Q96JH7 1222 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 YME1L1Q96TA2 773 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 RAD9AQ99638 391 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 ACBD6Q9BR61 282 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 MRPL45Q9BRJ2 306 aaKnown RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 TSGA10Q9BZW7 698 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 SDCBP2Q9H190 292 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 LHX5Q9H2C1 402 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 NOCTQ9UK39 431 aaKnown RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 ADAM28Q9UKQ2 775 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 CDH9Q9ULB4 789 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 PCDHGC3Q9UN70 934 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
MDC1-205ENST00000425072 GJB5O95377 273 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 LSM8O95777 96 aaKnown RBP10.98□□□□□ -0.65
MDC1-205ENST00000425072 FTLP02792 175 aaPredicted RBP10.98□□□□□ -0.65
MDC1-205ENST00000425072 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 SYN1P17600 705 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 CHRNB2P17787 502 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 LAG3P18627 525 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 RAP1GAPP47736 663 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 MTF1Q14872 753 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 MAPRE1Q15691 268 aaKnown RBP10.98□□□□□ -0.65
MDC1-205ENST00000425072 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 WSCD1Q658N2 575 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 OVOS1Q6IE37 1185 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 ACAD10Q6JQN1 1059 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 CD300LGQ6UXG3 332 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 FIBCD1Q8N539 461 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 MSANTD4Q8NCY6 345 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 NOX5Q96PH1 765 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.659e-7■□□□□ 10.2
MDC1-205ENST00000425072 PAAF1Q9BRP4 392 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 SYT11Q9BT88 431 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 MIS12Q9H081 205 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 ISCUQ9H1K1 167 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
MDC1-205ENST00000425072 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 DNAJB4Q9UDY4 337 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 L1RE1Q9UN81 338 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
MDC1-205ENST00000425072 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 H7C4K7 107 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 OAZ2O95190 189 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 MMEP08473 750 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 PTPN1P18031 435 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 LMO2P25791 158 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 BRCC3P46736 316 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 SLC11A1P49279 550 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 GATMP50440 423 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 VAV2P52735 878 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 GPC5P78333 572 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 DEFB103AP81534 67 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 HTRA4P83105 476 aaPredicted RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 FMO1Q01740 532 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 KRT17Q04695 432 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 YWHAHQ04917 246 aaPredicted RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 IFI16Q16666 785 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 PAN2Q504Q3 1202 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 ARHGAP17Q68EM7 881 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 ACOT1Q86TX2 421 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 TMEM130Q8N3G9 435 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 RNF10Q8N5U6 811 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 C3orf58Q8NDZ4 430 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 UBE2Q2Q8WVN8 375 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 KBTBD7Q8WVZ9 684 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 RABGGTAQ92696 567 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 TRIM11Q96F44 468 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 ZNF558Q96NG5 402 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 CWH43Q9H720 699 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 SPTLC3Q9NUV7 552 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 TRMT1Q9NXH9 659 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 PRG3Q9Y2Y8 225 aaPredicted RBP10.97□□□□□ -0.65
MDC1-205ENST00000425072 ATP8B3O60423 1300 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 SF3B1O75533 1304 aaKnown RBP eCLIP10.97□□□□□ -0.65
MDC1-205ENST00000425072 ALPK3Q96L96 1907 aa10.97□□□□□ -0.65
MDC1-205ENST00000425072 LTBP2Q14767 1821 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 KIF2AO00139 706 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 PJA2O43164 708 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 ZNF500O60304 480 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 CYP1A1P04798 512 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms