RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 TUBGCP2Q9BSJ2 902 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 FUCA2Q9BTY2 467 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 CYP4F11Q9HBI6 524 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 APOBEC3GQ9HC16 384 aaKnown RBP27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 FANCLQ9NW38 375 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 MAFFQ9ULX9 164 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 BRWD1Q9NSI6 2320 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 A8MXQ7 604 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 C8AP07357 584 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 PDGFRBP09619 1106 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 RAP1GAPP47736 663 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 CDH8P55286 799 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 SMARCB1Q12824 385 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 UVSSAQ2YD98 709 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 LEXMQ3ZCV2 418 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 PPM1LQ5SGD2 360 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 RARS2Q5T160 578 aaKnown RBP27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 CDH9Q9ULB4 789 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 BECN2A8MW95 431 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 LRRN2O75325 713 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 CDK11BP21127 795 aaKnown RBP27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 MRPS5P82675 430 aaKnown RBP27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 ITIH3Q06033 890 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 SYCE2Q6PIF2 218 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 C12orf76Q8N812 135 aaPredicted RBP27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 SLC7A14Q8TBB6 771 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 ATXN2LQ8WWM7 1075 aaKnown RBP27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 FAXDC2Q96IV6 333 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 SYT15Q9BQS2 421 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 CYP3A43Q9HB55 503 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 ZDHHC7Q9NXF8 308 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 FAM50BQ9Y247 325 aa27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 MTCL1Q9Y4B5 1905 aaKnown RBP27.15■■□□□ 1.94
TSPAN3-203ENST00000424443 PRUNE2Q8WUY3 3088 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 WEE2P0C1S8 567 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 TRIM21P19474 475 aaKnown RBP27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 LMO2P25791 158 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 ASPAP45381 313 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 LRMPQ12912 555 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 NFE2Q16621 373 aaPredicted RBP27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 PUS10Q3MIT2 529 aaKnown RBP27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 INTS6LQ5JSJ4 861 aaKnown RBP27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 TMC5Q6UXY8 1006 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 RTL10Q7L3V2 364 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 DNAI2Q9GZS0 605 aa27.14■■□□□ 1.94
TSPAN3-203ENST00000424443 CCDC195A0A1B0GUA6 201 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 RFPL2O75678 378 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 ZMYND10O75800 440 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 SLC34A2O95436 690 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 VWA3BQ502W6 1294 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 CDKAL1Q5VV42 579 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 TCEAL8Q8IYN2 117 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 SMRP1Q8NCR6 262 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 C2orf15Q8WU43 125 aaKnown RBP27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 NT5C1BQ96P26 610 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 BCO2Q9BYV7 579 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 NDST4Q9H3R1 872 aa27.13■■□□□ 1.93
TSPAN3-203ENST00000424443 MTMR11A4FU01 709 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 CAVIN2O95810 425 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 LRG1P02750 347 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 SMAD4Q13485 552 aaKnown RBP27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 MAPRE1Q15691 268 aaKnown RBP27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 EHBP1Q8NDI1 1231 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 TATDN2Q93075 761 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 SDCBP2Q9H190 292 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 ADAM7Q9H2U9 754 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 PIDD1Q9HB75 910 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 GCNT4Q9P109 453 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 GTF3C4Q9UKN8 822 aa27.12■■□□□ 1.93
TSPAN3-203ENST00000424443 HCRTO43612 131 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 HNRNPA1P09651 372 aaKnown RBP eCLIP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 CD58P19256 250 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 PSMC1P62191 440 aaKnown RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 DUSP4Q13115 394 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 PTCRAQ6ISU1 281 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 GBP6Q6ZN66 633 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 LRRTM3Q86VH5 581 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 TTC39CQ8N584 583 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 ATAD1Q8NBU5 361 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 CMASQ8NFW8 434 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 SPPL2BQ8TCT7 592 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 TNIP3Q96KP6 325 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 RIPOR3Q96MK2 946 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 S1PR5Q9H228 398 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 ABI2Q9NYB9 513 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 PCDHB5Q9Y5E4 795 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 SEC24AO95486 1093 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 TBXAS1P24557 533 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 HOXA9P31269 272 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 C4orf50Q6ZRC1 276 aa27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 SPATA2LQ8IUW3 424 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-203ENST00000424443 MBTPS2O43462 519 aa27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 XYLBO75191 536 aa27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 CDR1P51861 262 aa27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 NDST1P52848 882 aa27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 YWHAEP62258 255 aaKnown RBP27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 CUL2Q13617 745 aa27.1■■□□□ 1.93
TSPAN3-203ENST00000424443 NCAPHQ15003 741 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms