RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ACBD6Q9BR61 282 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 PRKD2Q9BZL6 878 aa22.69■■□□□ 1.22
TSPAN4-206ENST00000397408 CCL16O15467 120 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 TACC1O75410 805 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 CCDC192P0DO97 292 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 P4HA1P13674 534 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 PCSK1P29120 753 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 CDR1P51861 262 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 MARSP56192 900 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 STX1AQ16623 288 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 KLHL40Q2TBA0 621 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 UVSSAQ2YD98 709 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 INTS6LQ5JSJ4 861 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 LRRTM3Q86VH5 581 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 TRIM59Q8IWR1 403 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 DCP1BQ8IZD4 617 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 ATAD1Q8NBU5 361 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 FBXL13Q8NEE6 735 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 SEMA4DQ92854 862 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 CNOT6LQ96LI5 555 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 SNX25Q9H3E2 840 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 POMKQ9H5K3 350 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 PIDD1Q9HB75 910 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 MAFFQ9ULX9 164 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 INSL5Q9Y5Q6 135 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 TTC28Q96AY4 2481 aa22.68■■□□□ 1.22
TSPAN4-206ENST00000397408 LRRN2O75325 713 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 PAPLNO95428 1278 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 RAP1GAPP47736 663 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 CT47A1Q5JQC4 288 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 CYP26C1Q6V0L0 522 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 RTL10Q7L3V2 364 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 CCDC150Q8NCX0 1101 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 OR6B3Q8NGW1 331 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 NECAB3Q96P71 396 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 SYT15Q9BQS2 421 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 CRISPLD1Q9H336 500 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 APOBEC3GQ9HC16 384 aaKnown RBP22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 ANO10Q9NW15 660 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 RAB20Q9NX57 234 aa22.67■■□□□ 1.22
TSPAN4-206ENST00000397408 XYLBO75191 536 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 LRG1P02750 347 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 LMO2P25791 158 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 FMO5P49326 533 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 DUSP4Q13115 394 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 CREBRFQ8IUR6 639 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 TTC9BQ8N6N2 239 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 RHOBTB2Q9BYZ6 727 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 SDCBP2Q9H190 292 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 TMLHEQ9NVH6 421 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 ABI2Q9NYB9 513 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 YIPF1Q9Y548 306 aa22.66■■□□□ 1.22
TSPAN4-206ENST00000397408 PDGFRBP09619 1106 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 FAM163BP0C2L3 166 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 GNL1P36915 607 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 ASPAP45381 313 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 CDH8P55286 799 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 SMARCB1Q12824 385 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 CCDC142Q17RM4 750 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 C11orf57Q6ZUT1 292 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 PHF7Q9BWX1 381 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 THAP9Q9H5L6 903 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 PRKAG3Q9UGI9 489 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 CDH9Q9ULB4 789 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 SLC27A5Q9Y2P5 690 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 NME7Q9Y5B8 376 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 NCOR1O75376 2440 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 N4BP1O75113 896 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 ZP2Q05996 745 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 TYRO3Q06418 890 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 TWF1Q12792 350 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 NFE2Q16621 373 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 IRF2BP1Q8IU81 584 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 ADHFE1Q8IWW8 467 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 SPPL2BQ8TCT7 592 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 C2orf15Q8WU43 125 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 UHRF1Q96T88 793 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 PKMYT1Q99640 499 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 GTF3C4Q9UKN8 822 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 COQ4Q9Y3A0 265 aa22.65■■□□□ 1.22
TSPAN4-206ENST00000397408 DENND4AQ7Z401 1863 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 MYBPHLA2RUH7 354 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 A8MXQ7 604 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 ATP2C2O75185 946 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 POU2F2P09086 479 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 SP100P23497 879 aaPredicted RBP22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 KCNH2Q12809 1159 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 MGAT5BQ3V5L5 792 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 WDR44Q5JSH3 913 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 GRASPQ7Z6J2 395 aaPredicted RBP22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 SEPT5Q99719 369 aaPredicted RBP22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 BCO2Q9BYV7 579 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 CRTAC1Q9NQ79 661 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 PCDHB5Q9Y5E4 795 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 CLUHO75153 1309 aa22.64■■□□□ 1.21
TSPAN4-206ENST00000397408 DOCK6Q96HP0 2047 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms