RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 C1orf127Q8N9H9 656 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ADAM32Q8TC27 787 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 DDX23Q9BUQ8 820 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 NIFKQ9BYG3 293 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 RECQL4O94761 1208 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 PTPN11Q06124 597 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 MAMLD1Q13495 774 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 TXNRD3NBQ6F5E7 133 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 CEP57Q86XR8 500 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 BEST2Q8NFU1 509 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 JOSD2Q8TAC2 188 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 NRXN2Q9P2S2 1712 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 GOLGA8RI6L899 631 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 PPEF2O14830 753 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 POMCP01189 267 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 ELNP15502 786 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 ABCD1P33897 745 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 LIG3P49916 1009 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 YWHAGP61981 247 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 ALS2CLQ60I27 953 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 MTHFD1LQ6UB35 978 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 C12orf56Q8IXR9 622 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 ARFGAP2Q8N6H7 521 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.28
SMARCD1-202ENST00000394963 DDX3YO15523 660 aaKnown RBP16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 STBD1O95210 358 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 THPOP40225 353 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 ARHGAP1Q07960 439 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 TAF5Q15542 800 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 ZNF484Q5JVG2 852 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 ZNF662Q6ZS27 426 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 PALM2Q8IXS6 379 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 TWNKQ96RR1 684 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 KLF6Q99612 283 aaPredicted RBP16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 CEP41Q9BYV8 373 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.273e-6■□□□□ 8.8
SMARCD1-202ENST00000394963 TUBGCP4Q9UGJ1 667 aa16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 FEZ2Q9UHY8 353 aaPredicted RBP16.77■□□□□ 0.27
SMARCD1-202ENST00000394963 A0A0A6YYK5 440 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 ASS1P00966 412 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 SHBGP04278 402 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 CCDC130P13994 396 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 NOMO3P69849 1222 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 APBB1IPQ7Z5R6 666 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 ZBED8Q8IZ13 594 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 ST6GALNAC4Q9H4F1 302 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 MYH9P35579 1960 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 ASAP2O43150 1006 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 TJP3O95049 919 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 BCAR1P56945 870 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 TTC27Q6P3X3 843 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 CCDC13Q8IYE1 715 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 STRA6Q9BX79 667 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 E5RJQ4 531 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 STRNO43815 780 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 PROSCO94903 275 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 SMIM10L2AP0DMW4 78 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 SMIM10L2BP0DMW5 78 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 GHRP10912 638 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 RNASELQ05823 741 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 IFT88Q13099 833 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 SPRYD7Q5W111 196 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 KAT6AQ92794 2004 aa16.76■□□□□ 0.27
SMARCD1-202ENST00000394963 A6NJR5 290 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 CAND2O75155 1236 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 SPAG7O75391 227 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 SDC4P31431 198 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 RAPGEF5Q92565 580 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 MYO7AQ13402 2215 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 PODXLO00592 558 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 BANF1O75531 89 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 ANXA13P27216 316 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 MMRN1Q13201 1228 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 SH3PXD2AQ5TCZ1 1133 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 PLPPR4Q7Z2D5 763 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 OTUD6BQ8N6M0 293 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 FAM71DQ8N9W8 422 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 SIK2Q9H0K1 926 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 TMEM134Q9H6X4 195 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 DNPEPQ9ULA0 475 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 IRX4P78413 519 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 MFSD10Q14728 455 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
SMARCD1-202ENST00000394963 CCDC63Q8NA47 563 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms