RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 NPTX2P47972 431 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 MSLNQ13421 630 aaPredicted RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 TRIM25Q14258 630 aaKnown RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 DDR2Q16832 855 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 SHROOM1Q2M3G4 852 aaPredicted RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 NAPEPLDQ6IQ20 393 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 GRHL2Q6ISB3 625 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 ZNF513Q8N8E2 541 aaPredicted RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 ARHGEF26Q96DR7 871 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 ELAC2Q9BQ52 826 aaKnown RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 FAM167BQ9BTA0 163 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 KLHL25Q9H0H3 589 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 NIP7Q9Y221 180 aaKnown RBP eCLIP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 DRG1Q9Y295 367 aaKnown RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 TNRQ92752 1358 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 hCG_1642624A0A1W2PR95 340 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 STOMP27105 288 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 KDM7AQ6ZMT4 941 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 COL23A1Q86Y22 540 aaPredicted RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 DCUN1D1Q96GG9 259 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 SPRTNQ9H040 489 aaPredicted RBP10.29□□□□□ -0.76
VLDLR-203ENST00000382100 SAYSD1Q9NPB0 183 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 TMEM63CQ9P1W3 806 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 AATKQ6ZMQ8 1374 aa10.29□□□□□ -0.76
VLDLR-203ENST00000382100 AKAP8O43823 692 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PHF2O75151 1096 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MCL1Q07820 350 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MYLPFQ96A32 169 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 CPSF1Q10570 1443 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 TTLL8A6PVC2 850 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 FAM47E-STBD1D6RA91 191 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PSME3P61289 254 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 XRCC4Q13426 336 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SYCE2Q6PIF2 218 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 STAG2Q8N3U4 1231 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 HELQQ8TDG4 1101 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SPATA5L1Q9BVQ7 753 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MATN2O00339 956 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 FBXW4P57775 412 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 LGALS3BPQ08380 585 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 TRAP1Q12931 704 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PTPRNQ16849 979 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 KIAA1841Q6NSI8 718 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 A2MP01023 1474 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 GRIN2AQ12879 1464 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 ANXA9O76027 345 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 TTC23Q5W5X9 447 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RRN3Q9NYV6 651 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PCDHA5Q9Y5H7 936 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RBM47A0AV96 593 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 KLRF2D3W0D1 207 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 ZNF862O60290 1169 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PCNAP12004 261 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 GTF2H3Q13889 308 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SMCO1Q147U7 214 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RBBP8NLQ8NC74 664 aaPredicted RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 THTPAQ9BU02 230 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 DSEQ9UL01 958 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 BUB1O43683 1085 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 ZC3H11AO75152 810 aaKnown RBP eCLIP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 IFT43Q96FT9 208 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 ETAA1Q9NY74 926 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 KIAA1257Q9ULG3 409 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MYRFQ9Y2G1 1151 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 CHL1O00533 1208 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 INSCQ1MX18 579 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 FAM149B1Q96BN6 582 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RPF1Q9H9Y2 349 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 GMIPQ9P107 970 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 SEC14L4Q9UDX3 406 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 RPN2P04844 631 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 DLATP10515 647 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 CAPZA1P52907 286 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MXD4Q14582 209 aaPredicted RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 ZNF248Q8NDW4 579 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 HDAC2Q92769 488 aaKnown RBP10.28□□□□□ -0.76
VLDLR-203ENST00000382100 MAGEB18Q96M61 343 aa10.28□□□□□ -0.76
VLDLR-203ENST00000382100 TRIM2Q9C040 744 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 MLXIPQ9HAP2 919 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 GINM1Q9NU53 330 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 PTPN22Q9Y2R2 807 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 TRIM17Q9Y577 477 aa10.27□□□□□ -0.76
VLDLR-203ENST00000382100 MMP1P03956 469 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 CDK16Q00536 496 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 PDIA5Q14554 519 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 A0A1W2PRG6 482 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 LRRIQ4A6NIV6 560 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 GGCXP38435 758 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 PNOCQ13519 176 aa10.27□□□□□ -0.77
VLDLR-203ENST00000382100 ATP13A5Q4VNC0 1218 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms