RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 LRCH4O75427 683 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 GJB1P08034 283 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 GJA5P36382 358 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SCTRP47872 440 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 STAT5BP51692 787 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 EFNA5P52803 228 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 GPX6P59796 221 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SP4Q02446 784 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 Q3C1V9 767 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 TTC31Q49AM3 519 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-202ENST00000376659 IER5Q5VY09 327 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 RGS9BPQ6ZS82 235 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SEPT14Q6ZU15 432 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SH2D5Q6ZV89 423 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 C1orf127Q8N9H9 656 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SLC4A11Q8NBS3 891 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 CKAP2Q8WWK9 683 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 BICD1Q96G01 975 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 IP6K2Q9UHH9 426 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 GJD2Q9UKL4 321 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 EFR3BQ9Y2G0 817 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 FRMPD3Q5JV73 1810 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 TLR3O15455 904 aaKnown RBP10.15□□□□□ -0.79
TRIM39-202ENST00000376659 ERBB2P04626 1255 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 TNNI1P19237 187 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 GDF10P55107 478 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 POU5F1BQ06416 359 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 PKDCCQ504Y2 493 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.79
TRIM39-202ENST00000376659 EEF1DP3Q658K8 133 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 MPZL3Q6UWV2 235 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 DEPTORQ8TB45 409 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 GRK7Q8WTQ7 553 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 SLC7A3Q8WY07 619 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 MCRS1Q96EZ8 462 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 PEBP4Q96S96 227 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 CDT1Q9H211 546 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 MRPL47Q9HD33 250 aaKnown RBP10.15□□□□□ -0.79
TRIM39-202ENST00000376659 MTRF1LQ9UGC7 380 aaKnown RBP10.15□□□□□ -0.79
TRIM39-202ENST00000376659 AGAP1Q9UPQ3 857 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 GJA3Q9Y6H8 435 aa10.15□□□□□ -0.79
TRIM39-202ENST00000376659 RASGRF2O14827 1237 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 SNX3O60493 162 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 GABBR2O75899 941 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 STAU1O95793 577 aaKnown RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ETS1P14921 441 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 GAD2Q05329 585 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 RCOR2Q8IZ40 523 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 CEP120Q8N960 986 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 NAT8LQ8N9F0 302 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 JOSD2Q8TAC2 188 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 P3H4Q92791 437 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 MCEEQ96PE7 176 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 MRPL4Q9BYD3 311 aaKnown RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ASCC2Q9H1I8 757 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 HOMER3Q9NSC5 361 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 POLIQ9UNA4 740 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 THAP12O43422 761 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 TYROBPO43914 113 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ZSCAN5DPP0CG00 497 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 KRT10P13645 584 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 VCPP55072 806 aaKnown RBP10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ARHGAP1Q07960 439 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 CCDC38Q502W7 563 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 TAPT1Q6NXT6 567 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ASRGL1Q7L266 308 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 CROCCP2Q86T23 111 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 CXCL16Q9H2A7 254 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 GTF2IRD1Q9UHL9 959 aa10.14□□□□□ -0.79
TRIM39-202ENST00000376659 ADM5C9JUS6 153 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ACKR2O00590 384 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 RGS16O15492 202 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FAM155BO75949 473 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 PRKCBP05771 671 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FOXN2P32314 431 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 IFT88Q13099 833 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 NEDD9Q14511 834 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 KYNUQ16719 465 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 MSS51Q4VC12 460 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 MARCH8Q5T0T0 291 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TAX1BP1Q86VP1 789 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 CPXM1Q96SM3 734 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ELOVL4Q9GZR5 314 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 PDZD7Q9H5P4 517 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FETUBQ9UGM5 382 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TCEAL9Q9UHQ7 104 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TNFSF13BQ9Y275 285 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SIGLEC16A6NMB1 481 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms