RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TOP3AQ13472 1001 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 SNX30Q5VWJ9 437 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 TBC1D19Q8N5T2 526 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-204ENST00000375290 AGPAT5Q9NUQ2 364 aa10.62□□□□□ -0.71
PTCH1-204ENST00000375290 ANKRD65E5RJM6 399 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 USP1O94782 785 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 XPAP23025 273 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 LRRC8DQ7L1W4 858 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ZDHHC17Q8IUH5 632 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 VPS50Q96JG6 964 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 FAM193BQ96PV7 902 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 C20orf96Q9NUD7 363 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PCDHA10Q9Y5I2 948 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PPLO60437 1756 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 KRT87PA6NCN2 255 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 IFNA14P01570 189 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 GARTP22102 1010 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 DGUOKQ16854 277 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 LPAR1Q92633 364 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 DPF2Q92785 391 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PTPRN2Q92932 1015 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 TATDN2Q93075 761 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 CACNA2D1P54289 1103 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 CDK16Q00536 496 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SMYD5Q6GMV2 418 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 STARD8Q92502 1023 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PHF21AQ96BD5 680 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 EIF2AK1Q9BQI3 630 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 CD248Q9HCU0 757 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ANKEF1Q9NU02 776 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 KITP10721 976 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 STXBP2Q15833 593 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 AARS2Q5JTZ9 985 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 RUBCNLQ9H714 662 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 MAD2L2Q9UI95 211 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SPATA31D1Q6ZQQ2 1576 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ZNF185O15231 689 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SERPINH1P50454 418 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 NFX1Q12986 1120 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 TKFCQ3LXA3 575 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 RAB42Q8N4Z0 105 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 CD3EAPO15446 510 aaKnown RBP10.61□□□□□ -0.71
PTCH1-204ENST00000375290 FAM200BP0CF97 657 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SEL1L3Q68CR1 1132 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 C1orf228Q6PIY5 440 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 FNIP1Q8TF40 1166 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 HDAC7Q8WUI4 952 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SLC13A1Q9BZW2 595 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 NR2C2P49116 596 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 RGS4P49798 205 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 USP17L2Q6R6M4 530 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 IZUMO2Q6UXV1 221 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SPATA18Q8TC71 538 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ZBTB10Q96DT7 871 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 SYNPO2Q9UMS6 1093 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 EVPLLA8MZ36 301 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 ATP4AP20648 1035 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 RGS21Q2M5E4 152 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 CCDC103Q8IW40 242 aa10.61□□□□□ -0.71
PTCH1-204ENST00000375290 MROH7Q68CQ1 1323 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CHD1O14646 1710 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 BCL10O95999 233 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 RASA2Q15283 850 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SNRNP35Q16560 246 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 KLHL12Q53G59 568 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 MICU2Q8IYU8 434 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CNDP1Q96KN2 507 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 IRX2Q9BZI1 471 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 KRT6AP02538 564 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 KRT6BP04259 564 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 MPOP05164 745 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 APRTP07741 180 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CCDC130P13994 396 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ACADVLP49748 655 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 TSC22D1Q15714 1073 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CCNYL1Q8N7R7 359 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DRG1Q9Y295 367 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 HEY1Q9Y5J3 304 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ERI2A8K979 691 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 GDF11O95390 407 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SAMD4BQ5PRF9 694 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ARID3BQ8IVW6 561 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 RRM2BQ7LG56 351 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CAMK1DQ8IU85 385 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SRBD1Q8N5C6 995 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms