RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SLC47A2Q86VL8 602 aa19.63■□□□□ 0.73
VEGFA-206ENST00000372077 SLC30A5Q8TAD4 765 aa19.63■□□□□ 0.73
VEGFA-206ENST00000372077 SMYD3Q9H7B4 428 aa19.63■□□□□ 0.73
VEGFA-206ENST00000372077 INPP5FQ9Y2H2 1132 aa19.63■□□□□ 0.73
VEGFA-206ENST00000372077 PCDHA13Q9Y5I0 950 aa19.63■□□□□ 0.73
VEGFA-206ENST00000372077 TTC3P53804 2025 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 SPTLC1O15269 473 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 FGFR1P11362 822 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 CYP11B1P15538 503 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 KRT83P78385 493 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 IKBKEQ14164 716 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 NOMO2Q5JPE7 1267 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 NOP9Q86U38 636 aaKnown RBP19.62■□□□□ 0.73
VEGFA-206ENST00000372077 RBBP8NLQ8NC74 664 aaPredicted RBP19.62■□□□□ 0.73
VEGFA-206ENST00000372077 AGPAT1Q99943 283 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 ADAMTS1Q9UHI8 967 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 NENFQ9UMX5 172 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 TDRD15B5MCY1 1934 aaKnown RBP19.62■□□□□ 0.73
VEGFA-206ENST00000372077 A0A087X0T9 212 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 FAM228BP0C875 321 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 CDH8P55286 799 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 TUSC3Q13454 348 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 SV2CQ496J9 727 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 SND1Q7KZF4 910 aaKnown RBP eCLIP19.62■□□□□ 0.734e-9■■□□□ 11.5
VEGFA-206ENST00000372077 LIMS2Q7Z4I7 341 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 ACP6Q9NPH0 428 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 KANSL3Q9P2N6 904 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 MICAL3Q7RTP6 2002 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 ALPK3Q96L96 1907 aa19.62■□□□□ 0.73
VEGFA-206ENST00000372077 KPNA7A9QM74 516 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 TULP2O00295 520 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 DDX3XO00571 662 aaKnown RBP eCLIP19.61■□□□□ 0.732e-9■■■□□ 18.2
VEGFA-206ENST00000372077 CSF2RAP15509 400 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 RAP1GAPP47736 663 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 LILRA4P59901 499 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 SLC20A2Q08357 652 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 TRADDQ15628 312 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 TMEM199Q8N511 208 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 LNX1Q8TBB1 728 aaPredicted RBP19.61■□□□□ 0.73
VEGFA-206ENST00000372077 DDX1Q92499 740 aaKnown RBP19.61■□□□□ 0.73
VEGFA-206ENST00000372077 DDX27Q96GQ7 796 aaKnown RBP19.61■□□□□ 0.73
VEGFA-206ENST00000372077 PACSIN1Q9BY11 444 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 SNX9Q9Y5X1 595 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 PODXLO00592 558 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 CHRNB2P17787 502 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 CD58P19256 250 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 CLCNKBP51801 687 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 INCA1Q0VD86 236 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 UPP1Q16831 310 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 VPS36Q86VN1 386 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 NPAS4Q8IUM7 802 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 URGCPQ8TCY9 931 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 SLC20A1Q8WUM9 679 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 UROC1Q96N76 676 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 MAGEA1P43355 309 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 WHAMMQ8TF30 809 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 CACNG4Q9UBN1 327 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 FEZ2Q9UHY8 353 aaPredicted RBP19.61■□□□□ 0.73
VEGFA-206ENST00000372077 LRFN2Q9ULH4 789 aa19.61■□□□□ 0.73
VEGFA-206ENST00000372077 ABHD14A-ACY1A0A1B0GW23 586 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 CILPO75339 1184 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 PFKMP08237 780 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 PDE6CP51160 858 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 DSC1Q08554 894 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 RPUSD2Q8IZ73 545 aaKnown RBP19.6■□□□□ 0.73
VEGFA-206ENST00000372077 CASD1Q96PB1 797 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 LTBP2Q14767 1821 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 CASTOR2A6NHX0 329 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 HOXA2O43364 376 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 TNFAIP3P21580 790 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 KCTD16Q68DU8 428 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.6■□□□□ 0.732e-35■■■■□ 22.7
VEGFA-206ENST00000372077 ZNF677Q86XU0 584 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 TXLNBQ8N3L3 684 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 IFT81Q8WYA0 676 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 RSPH1Q8WYR4 309 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 PAAF1Q9BRP4 392 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 SELENOOQ9BVL4 669 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 TBC1D13Q9NVG8 400 aa19.6■□□□□ 0.73
VEGFA-206ENST00000372077 IGFBP6P24592 240 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-206ENST00000372077 CDR2Q01850 454 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 SOWAHAQ2M3V2 549 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 NAGPAQ9UK23 515 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 BARX2Q9UMQ3 279 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-206ENST00000372077 TACC1O75410 805 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 DDHD2O94830 711 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 FAM163BP0C2L3 166 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 FMO1Q01740 532 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 CCDC181Q5TID7 509 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 ZNF662Q6ZS27 426 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 DPH6Q7L8W6 267 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 GLYCTKQ8IVS8 523 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 C3orf58Q8NDZ4 430 aa19.59■□□□□ 0.73
VEGFA-206ENST00000372077 SYF2O95926 243 aaKnown RBP19.58■□□□□ 0.73
VEGFA-206ENST00000372077 PAX3P23760 479 aa19.58■□□□□ 0.73
VEGFA-206ENST00000372077 AARSP49588 968 aaKnown RBP eCLIP19.58■□□□□ 0.737e-7■■■□□ 15.8
VEGFA-206ENST00000372077 RAD23BP54727 409 aa19.58■□□□□ 0.73
VEGFA-206ENST00000372077 CD300LGQ6UXG3 332 aa19.58■□□□□ 0.73
VEGFA-206ENST00000372077 ZNF280BQ86YH2 543 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms