RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GCNAQ96QF7 691 aa22.84■■□□□ 1.25
CD47-202ENST00000361309 SLC46A2Q9BY10 475 aa22.84■■□□□ 1.25
CD47-202ENST00000361309 ZHX3Q9H4I2 956 aa22.84■■□□□ 1.25
CD47-202ENST00000361309 DSEQ9UL01 958 aa22.84■■□□□ 1.25
CD47-202ENST00000361309 DERAQ9Y315 318 aa22.84■■□□□ 1.25
CD47-202ENST00000361309 ANKRD63C9JTQ0 380 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 CYB561D2O14569 222 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 NMT1P30419 496 aaKnown RBP22.83■■□□□ 1.25
CD47-202ENST00000361309 HOXA6P31267 233 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 MCM2P49736 904 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 MCM6Q14566 821 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 ITPRIPL2Q3MIP1 535 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 METTL23Q86XA0 190 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 AK8Q96MA6 479 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 PYM1Q9BRP8 204 aaKnown RBP22.83■■□□□ 1.25
CD47-202ENST00000361309 BLOC1S4Q9NUP1 217 aa22.83■■□□□ 1.25
CD47-202ENST00000361309 THG1LQ9NWX6 298 aaKnown RBP22.83■■□□□ 1.25
CD47-202ENST00000361309 H3BQV1 296 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 SLC26A4O43511 780 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 KRT18P05783 430 aaKnown RBP22.82■■□□□ 1.24
CD47-202ENST00000361309 UBA7P41226 1012 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 GTF2BQ00403 316 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 TAF12Q16514 161 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 PKN3Q6P5Z2 889 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 LRRTM3Q86VH5 581 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 THEM5Q8N1Q8 247 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 FIZ1Q96SL8 496 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 ASB7Q9H672 318 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 GKN1Q9NS71 199 aa22.82■■□□□ 1.24
CD47-202ENST00000361309 TISP43B9A030 160 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 EXTL3O43909 919 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 TAF6P49848 677 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 ZC2HC1CQ53FD0 456 aaPredicted RBP22.81■■□□□ 1.24
CD47-202ENST00000361309 WSCD1Q658N2 575 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 ADALQ6DHV7 355 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 CMTM8Q8IZV2 173 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 SPPL2BQ8TCT7 592 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 C2orf15Q8WU43 125 aaKnown RBP22.81■■□□□ 1.24
CD47-202ENST00000361309 DPP3Q9NY33 737 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 ABI2Q9NYB9 513 aaPredicted RBP22.81■■□□□ 1.24
CD47-202ENST00000361309 C2CD2Q9Y426 696 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 MYO16Q9Y6X6 1858 aa22.81■■□□□ 1.24
CD47-202ENST00000361309 AXIN1O15169 862 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 HAPLN1P10915 354 aaPredicted RBP22.8■■□□□ 1.24
CD47-202ENST00000361309 PLCG1P19174 1290 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 GJB2P29033 226 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 PXNP49023 591 aaPredicted RBP22.8■■□□□ 1.24
CD47-202ENST00000361309 PTPAQ15257 358 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 RAD54LQ92698 747 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 FAM83CQ9BQN1 747 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 HPS4Q9NQG7 708 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 CCL26Q9Y258 94 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 ANAPC1Q9H1A4 1944 aa22.8■■□□□ 1.24
CD47-202ENST00000361309 LAMA1P25391 3075 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 FOXD2O60548 495 aaPredicted RBP22.79■■□□□ 1.24
CD47-202ENST00000361309 TBCAO75347 108 aaKnown RBP22.79■■□□□ 1.24
CD47-202ENST00000361309 SMARCB1Q12824 385 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 RUNX3Q13761 415 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 KARSQ15046 597 aaKnown RBP22.79■■□□□ 1.24
CD47-202ENST00000361309 TRIM68Q6AZZ1 485 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 TMEM150AQ86TG1 271 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 MAB21L3Q8N8X9 362 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 EBF3Q9H4W6 596 aa22.79■■□□□ 1.24
CD47-202ENST00000361309 AGO2Q9UKV8 859 aaKnown RBP22.79■■□□□ 1.24
CD47-202ENST00000361309 OTOL1A6NHN0 477 aaPredicted RBP22.78■■□□□ 1.24
CD47-202ENST00000361309 F11P03951 625 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 KCNA4P22459 653 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 ABCD1P33897 745 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 AVPR1AP37288 418 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 GRIN1Q05586 938 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 CCDC6Q16204 474 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 AASDHQ4L235 1098 aaPredicted RBP22.78■■□□□ 1.24
CD47-202ENST00000361309 TMEM196Q5HYL7 178 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 ERICH6BQ5W0A0 696 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 SLFN12LQ6IEE8 588 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 FSTL4Q6MZW2 842 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 DCP1BQ8IZD4 617 aaKnown RBP22.78■■□□□ 1.24
CD47-202ENST00000361309 RASSF8Q8NHQ8 419 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 GAB3Q8WWW8 586 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 USP13Q92995 863 aaPredicted RBP22.78■■□□□ 1.24
CD47-202ENST00000361309 CHFRQ96EP1 664 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 CCSER1Q9C0I3 900 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 ARRDC1-AS1Q9H2J1 176 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 IKZF4Q9H2S9 585 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 ZMYM5Q9UJ78 669 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 USP24Q9UPU5 2620 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 STYXL1Q9Y6J8 313 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 KIAA1549LQ6ZVL6 1849 aa22.78■■□□□ 1.24
CD47-202ENST00000361309 KPNA7A9QM74 516 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 HMGA1P17096 107 aaKnown RBP22.77■■□□□ 1.24
CD47-202ENST00000361309 NLRP12P59046 1061 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 GRSF1Q12849 480 aaKnown RBP eCLIP22.77■■□□□ 1.24
CD47-202ENST00000361309 BFSP1Q12934 665 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 SF3A2Q15428 464 aaKnown RBP22.77■■□□□ 1.24
CD47-202ENST00000361309 EFCAB13Q8IY85 973 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 STKLD1Q8NE28 680 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 TMX3Q96JJ7 454 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 TMLHEQ9NVH6 421 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 PCDHB5Q9Y5E4 795 aa22.77■■□□□ 1.24
CD47-202ENST00000361309 TRDMT1O14717 391 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms