RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 MMP19Q99542 508 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 CISHQ9NSE2 258 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 KCNN4O15554 427 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 ADORA2BP29275 332 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 RFC5P40937 340 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 TAP1Q03518 808 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 GEN1Q17RS7 908 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 ATP13A4Q4VNC1 1196 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 FAXCQ5TGI0 409 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 MAP3K20Q9NYL2 800 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 CFAP73A6NFT4 308 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 PLSCR1O15162 318 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 TMEM62Q0P6H9 643 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 VSIG10LQ86VR7 867 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 OGTO15294 1046 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 CCNE2O96020 404 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 ZSCAN5DPP0CG00 497 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL20A1-201ENST00000358894 GYG2O15488 501 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 ITGB3P05106 788 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 MFSD7Q6UXD7 560 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 CPNE8Q86YQ8 564 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 NOD2Q9HC29 1040 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 PSMC3IPQ9P2W1 217 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-201ENST00000358894 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 SLIT2O94813 1529 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 M0QZ92 97 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 UBOX5O94941 541 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 SKIP12755 728 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 CTCFP49711 727 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-201ENST00000358894 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
COL20A1-201ENST00000358894 CCNG2Q16589 344 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 IER5Q5VY09 327 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 LVRNQ6Q4G3 990 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 L3MBTL1Q9Y468 752 aa12.87□□□□□ -0.35
COL20A1-201ENST00000358894 A8MXQ7 604 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 HAUS5O94927 633 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 KRT4P19013 534 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 ARFIP2P53365 341 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
COL20A1-201ENST00000358894 CUL3Q13618 768 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 DAW1Q8N136 415 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 RASGEF1CQ8N431 466 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 ACTL9Q8TC94 416 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 PGM2Q96G03 612 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 SCYL1Q96KG9 808 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 PSEN1P49768 467 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 OVGP1Q12889 678 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL20A1-201ENST00000358894 CCDC33Q8N5R6 958 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 TRAPPC12Q8WVT3 735 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 GRAMD1AQ96CP6 724 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 F8VP50 259 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 MMP14P50281 582 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 SIX6OS1Q8N1H7 587 aa12.86□□□□□ -0.35
COL20A1-201ENST00000358894 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
COL20A1-201ENST00000358894 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
COL20A1-201ENST00000358894 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 KRT38O76015 456 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 DSG3P32926 999 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 RAPH1Q70E73 1250 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 NINJ2Q9NZG7 142 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 MARCOQ9UEW3 520 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-201ENST00000358894 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
COL20A1-201ENST00000358894 CHD4Q14839 1912 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms