RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HPS3Q969F9 1004 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 PAK5Q9P286 719 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CYP26A1O43174 497 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 TSPAN9O75954 239 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF23P17027 643 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 GJA8P48165 433 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 KRT33BQ14525 404 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 THEMIS2Q5TEJ8 643 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MAGEC3Q8TD91 643 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 C17orf80Q9BSJ5 609 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 PHF20Q9BVI0 1012 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 KCND2Q9NZV8 630 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 STK39Q9UEW8 545 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SOX13Q9UN79 622 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MYH14Q7Z406 1995 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 LOC100653049A0A140TA62 436 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 KRT34O76011 436 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 AKR1B1P15121 316 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 IL12RB1P42701 662 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CDK8P49336 464 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 AQP5P55064 265 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 HERVK_113P62684 666 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SLC7A5P2Q9GIP4 190 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 STAP1Q9ULZ2 295 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 FIGNQ5HY92 759 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TAF2Q6P1X5 1199 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PPHLN1Q8NEY8 458 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 GANCQ8TET4 914 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 RNF139Q8WU17 664 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KRT35Q92764 455 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 MTERF3Q96E29 417 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 A1CFQ9NQ94 594 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 IMPAD1Q9NX62 359 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 NAGPAQ9UK23 515 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PPLO60437 1756 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TNPO2O14787 897 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 ZBTB39O15060 712 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KRT6BP04259 564 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 GUCY1A2P33402 732 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KRT6CP48668 564 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PTENP60484 403 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TMEM63BQ5T3F8 832 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PRCCQ92733 491 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 MCEEQ96PE7 176 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 GRIP2Q9C0E4 1043 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 FANCEQ9HB96 536 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PNMA8CA0A1B0GUJ8 204 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 MFN2O95140 757 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TTKP33981 857 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 SPANXN2Q5MJ10 180 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KYQ8NBH2 561 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PDCD6IPQ8WUM4 868 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 CNPY3Q9BT09 278 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TMEM117Q9H0C3 514 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 GOLPH3Q9H4A6 298 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 CHD1O14646 1710 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 AP5Z1O43299 807 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 EFHC2Q5JST6 749 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 ZBTB49Q6ZSB9 765 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 EIF1ADQ8N9N8 165 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 OR6Y1Q8NGX8 325 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 SLC30A5Q8TAD4 765 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PPP1R2P1Q96PQ5 205 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 APOL4Q9BPW4 351 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 F5H423 210 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 NCKAP1LP55160 1127 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 CLEC4GQ6UXB4 293 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 IFNEQ86WN2 208 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DEFB107AQ8IZN7 70 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 ZCCHC7Q8N3Z6 543 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 CALML6Q8TD86 181 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 RRN3Q9NYV6 651 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 A0A0A6YYK5 440 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM49D1C9J1S8 452 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 M0QYV0 167 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KCNK10P57789 538 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 KLHL12Q53G59 568 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DYNLL2Q96FJ2 89 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 LXNQ9BS40 222 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 A0A087WXM4 84 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DDX5P17844 614 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 STK4Q13043 487 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF394Q53GI3 561 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 C4orf22Q6V702 233 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 OR8H2Q8N162 312 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 OR6P1Q8NGX9 317 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 GPR101Q96P66 508 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 RBBP8Q99708 897 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DCUN1D5Q9BTE7 237 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 DHX36Q9H2U1 1008 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms