RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 MYBL1P10243 752 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 COMTP21964 271 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 GLRA2P23416 452 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 GBP1P32455 592 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 TCF7P36402 384 aaPredicted RBP11.77□□□□□ -0.52
SNU13-202ENST00000355257 HSD17B3P37058 310 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 USP8P40818 1118 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 PTGIRP43119 386 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 LIG4P49917 911 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 IRAK1P51617 712 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 POLGP54098 1239 aaPredicted RBP11.77□□□□□ -0.52
SNU13-202ENST00000355257 STRN3Q13033 797 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 UAP1Q16222 522 aaPredicted RBP11.77□□□□□ -0.52
SNU13-202ENST00000355257 PTPROQ16827 1216 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 CRELD2Q6UXH1 353 aaPredicted RBP11.77□□□□□ -0.52
SNU13-202ENST00000355257 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 ZNF564Q8TBZ8 553 aaPredicted RBP11.77□□□□□ -0.52
SNU13-202ENST00000355257 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 KRT35Q92764 455 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 PCYT2Q99447 389 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 ERP44Q9BS26 406 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 NEUROG2Q9H2A3 272 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 TMBIM4Q9HC24 238 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 TMEM51Q9NW97 253 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 CNTN6Q9UQ52 1028 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 MYH10P35580 1976 aa11.77□□□□□ -0.52
SNU13-202ENST00000355257 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 A0A0B4J269 797 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 DAPK3O43293 454 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CYP1A1P04798 512 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 KCNQ1P51787 676 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 DR1Q01658 176 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 MGAT3Q09327 533 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 HLTFQ14527 1009 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNU13-202ENST00000355257 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 TMC3Q7Z5M5 1100 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 RPAINQ86UA6 219 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 ASAP3Q8TDY4 903 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 BICD1Q96G01 975 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ATP6V1G3Q96LB4 118 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 NUP85Q9BW27 656 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 NRBP2Q9NSY0 501 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ZDHHC18Q9NUE0 388 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 AGO2Q9UKV8 859 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 EVPLQ92817 2033 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 MYH9P35579 1960 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 PODXLO00592 558 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 EIF3HO15372 352 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNU13-202ENST00000355257 KRT14P02533 472 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CHRNA1P02708 482 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CTSHP09668 335 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 ACO1P21399 889 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 SP4Q02446 784 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 BIRC3Q13489 604 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 MESDQ14696 234 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 PPP1R2P3Q6NXS1 205 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ZPBP2Q6X784 338 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 TRIM72Q6ZMU5 477 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNU13-202ENST00000355257 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 MCOLN2Q8IZK6 566 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 SLC7A3Q8WY07 619 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 SEPT1Q8WYJ6 367 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ZBTB9Q96C00 473 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 FNBP1Q96RU3 617 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CGRRF1Q99675 332 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 CELF4Q9BZC1 486 aaKnown RBP11.76□□□□□ -0.53
SNU13-202ENST00000355257 HAPLN2Q9GZV7 340 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ERVK-5Q9HDB9 667 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 ACP6Q9NPH0 428 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 C1orf112Q9NSG2 853 aa11.76□□□□□ -0.53
SNU13-202ENST00000355257 NRCAMQ92823 1304 aa11.75□□□□□ -0.53
SNU13-202ENST00000355257 CNTNAP2Q9UHC6 1331 aa11.75□□□□□ -0.53
SNU13-202ENST00000355257 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms