RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 DMAC2Q9NW81 257 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 PCSK1NQ9UHG2 260 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 ALG6Q9Y672 507 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 DEUP1Q05D60 604 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 C11orf63Q6NUN7 778 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 ANKS4BQ8N8V4 417 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 GLIS3Q8NEA6 775 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 TPCN2Q8NHX9 752 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 DEFB118Q96PH6 123 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 FMO2Q99518 471 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 NOC2LQ9Y3T9 749 aaKnown RBP14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 FAM170AA1A519 330 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 SMIM23A6NLE4 172 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 PSMD3O43242 534 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 KRT15P19012 456 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 RGS7P49802 495 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 GJA9P57773 515 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 CBWD6Q4V339 395 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 CBWD3Q5JTY5 395 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 CBWD5Q5RIA9 395 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 ACOT1Q86TX2 421 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 ZNF606Q8WXB4 792 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 TSPYL2Q9H2G4 693 aaPredicted RBP14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 PRDM16Q9HAZ2 1276 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 PTPN22Q9Y2R2 807 aa14.4□□□□□ -0.1
CSNK1G3-201ENST00000345990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 TM4SF4P48230 202 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 ZNF135P52742 658 aaPredicted RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 SNX1Q13596 522 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 ALS2CLQ60I27 953 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 ZNF571Q7Z3V5 609 aaPredicted RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 ATL2Q8NHH9 583 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 NPLOC4Q8TAT6 608 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 PXYLP1Q8TE99 480 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 SHC3Q92529 594 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 TATDN2Q93075 761 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 RNF25Q96BH1 459 aaPredicted RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 PPANQ9NQ55 473 aaKnown RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 FAM105AQ9NUU6 356 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 TJP2Q9UDY2 1190 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 DOCK2Q92608 1830 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 CSDE1O75534 798 aaKnown RBP14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 CENPCQ03188 943 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 MGAT5BQ3V5L5 792 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 TTC25Q96NG3 672 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.115e-7■■■■■ 36.8
CSNK1G3-201ENST00000345990 KCND1Q9NSA2 647 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 PJA2O43164 708 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 CPP00450 1065 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 MMEP08473 750 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 FGFR4P22455 802 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 GUCY2FP51841 1108 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 COPS2P61201 443 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 NUDT18Q6ZVK8 323 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 AFAP1L2Q8N4X5 818 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 SHISA4Q96DD7 197 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 CNPY3Q9BT09 278 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 FBXO44Q9H4M3 255 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 PCDHB5Q9Y5E4 795 aa14.39□□□□□ -0.11
CSNK1G3-201ENST00000345990 F2P00734 622 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 AKAP5P24588 427 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 HEATR6Q6AI08 1181 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ZNF662Q6ZS27 426 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.38□□□□□ -0.119e-7■■■■■ 62.8
CSNK1G3-201ENST00000345990 GANQ9H2C0 597 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 DNAJC25-GNG10A0A024R161 153 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 USP27XA6NNY8 438 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ASS1P00966 412 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 CYBBP04839 570 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 PLTPP55058 493 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ARL4CP56559 192 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 TPI1P60174 286 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ROR1Q01973 937 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 PDK2Q15119 407 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 NOMO2Q5JPE7 1267 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 TOP6BLQ8N6T0 577 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 PAIP2Q9BPZ3 127 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 AP1M1Q9BXS5 423 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 CATSPERBQ9H7T0 1116 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 DDX43Q9NXZ2 648 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 NDST1P52848 882 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 BASP1P80723 227 aaKnown RBP14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 ATP11AP98196 1134 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 MBTD1Q05BQ5 628 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 SMARCB1Q12824 385 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 NME3Q13232 169 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 CNGA2Q16280 664 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
CSNK1G3-201ENST00000345990 REXO1L1PQ8IX06 675 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms