RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 DNPEPQ9ULA0 475 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 DCDC2CA8MYV0 355 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 TRIM49D1C9J1S8 452 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 BANF1O75531 89 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 PRELID2Q8N945 189 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 TIPINQ9BVW5 301 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 DDX56Q9NY93 547 aaKnown RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 NAALADL1Q9UQQ1 740 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 PROSCO94903 275 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 RBP5P82980 135 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 NDUFAF2Q8N183 169 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDH5-201ENST00000341529 SEMA4DQ92854 862 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 NT5C1AQ9BXI3 368 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 NUF2Q9BZD4 464 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 UNKQ9C0B0 810 aaKnown RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 HAO1Q9UJM8 370 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 GMNNO75496 209 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 ATG16L1Q676U5 607 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
CDH5-201ENST00000341529 FBXO36Q8NEA4 188 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 TSSK1BQ9BXA7 367 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 GTSE1Q9NYZ3 720 aa12.54□□□□□ -0.4
CDH5-201ENST00000341529 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 DFFAO00273 331 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 FNTAP49354 379 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 RPL7AP62424 266 aaKnown RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 SGF29Q96ES7 293 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 APOBEC2Q9Y235 224 aaKnown RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 MAFGO15525 162 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 HMBSP08397 361 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 TNFSF9P41273 254 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 IER5Q5VY09 327 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 CYB5D1Q6P9G0 228 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 PSMC3IPQ9P2W1 217 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 RIPK2O43353 540 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 PECAM1P16284 738 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 HNRNPH3P31942 346 aaKnown RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 SCTRP47872 440 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 JAG1P78504 1218 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 LONP2Q86WA8 852 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 RUBCNQ92622 972 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 SUDS3Q9H7L9 328 aaPredicted RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 L3MBTL1Q9Y468 752 aa12.53□□□□□ -0.4
CDH5-201ENST00000341529 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
CDH5-201ENST00000341529 SPECC1L-ADORA2AF8WAN1 911 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 SNHG28P0DPA3 235 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 SULT1E1P49888 294 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 OCRLQ01968 901 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 DBN1Q16643 649 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 ANO5Q75V66 913 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 FAM136AQ96C01 138 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 MYO9BQ13459 2157 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 KIF1AQ12756 1690 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 XRN1Q8IZH2 1706 aaKnown RBP12.52□□□□□ -0.4
CDH5-201ENST00000341529 SH3BP5O60239 455 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 TTC4O95801 387 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 EGFRP00533 1210 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 CYP2C9P11712 490 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.4
CDH5-201ENST00000341529 LAMTOR4Q0VGL1 99 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 RPAINQ86UA6 219 aa12.52□□□□□ -0.4
CDH5-201ENST00000341529 RSPH3Q86UC2 560 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms