RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SFPQP23246 707 aaKnown RBP eCLIP12.49□□□□□ -0.41
ATXN3-201ENST00000340660 MLH1P40692 756 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 UCNP55089 124 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 CCDC157Q569K6 752 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 FIGNL1Q6PIW4 674 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 ABHD15Q6UXT9 468 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 TRMT1LQ7Z2T5 733 aaKnown RBP12.49□□□□□ -0.41
ATXN3-201ENST00000340660 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 HASPINQ8TF76 798 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
ATXN3-201ENST00000340660 NAF1Q96HR8 494 aaKnown RBP12.49□□□□□ -0.41
ATXN3-201ENST00000340660 NFASCO94856 1347 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 MAGEB2O15479 319 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 BRINP1O60477 761 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
ATXN3-201ENST00000340660 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.414e-7■■■□□ 17.3
ATXN3-201ENST00000340660 TMOD1P28289 359 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 GRNP28799 593 aaKnown RBP12.48□□□□□ -0.41
ATXN3-201ENST00000340660 SNRPNP63162 240 aaKnown RBP12.48□□□□□ -0.41
ATXN3-201ENST00000340660 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
ATXN3-201ENST00000340660 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 FAM160B1Q5W0V3 765 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 HAUS6Q7Z4H7 955 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 PNMA5Q96PV4 448 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 PIGSQ96S52 555 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 CDC6Q99741 560 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 GCOM2Q9BZD3 368 aaPredicted RBP12.48□□□□□ -0.41
ATXN3-201ENST00000340660 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 SLITRK6Q9H5Y7 841 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 ZNF302Q9NR11 478 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 NBASA2RRP1 2371 aa12.48□□□□□ -0.41
ATXN3-201ENST00000340660 A0A1W2PNR3 127 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 MEIS2O14770 477 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 MAFGO15525 162 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 TADA2AO75478 443 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 DRD1P21728 446 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 GALK1P51570 392 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 GRIK2Q13002 908 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 DRP2Q13474 957 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 TBC1D25Q3MII6 688 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 FBXO43Q4G163 708 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 CYP4A22Q5TCH4 519 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 BROXQ5VW32 411 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 ARID3BQ8IVW6 561 aaPredicted RBP12.47□□□□□ -0.41
ATXN3-201ENST00000340660 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 SMG8Q8ND04 991 aaKnown RBP12.47□□□□□ -0.41
ATXN3-201ENST00000340660 SMARCC2Q8TAQ2 1214 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 SHKBP1Q8TBC3 707 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 ZNF358Q9NW07 568 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
ATXN3-201ENST00000340660 A0A087WZ62 844 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 PALM3A6NDB9 673 aaPredicted RBP12.46□□□□□ -0.41
ATXN3-201ENST00000340660 ITGB2P05107 769 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 MYL4P12829 197 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATXN3-201ENST00000340660 SUZ12Q15022 739 aaKnown RBP12.46□□□□□ -0.41
ATXN3-201ENST00000340660 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 SWSAP1Q6NVH7 229 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 TTC30AQ86WT1 665 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 EDARADDQ8WWZ3 215 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 SDF4Q9BRK5 362 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 FDXACB1Q9BRP7 624 aaPredicted RBP12.46□□□□□ -0.41
ATXN3-201ENST00000340660 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 LY9Q9HBG7 655 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 HPS4Q9NQG7 708 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 BTBD3Q9Y2F9 522 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 CDY1Q9Y6F8 540 aa12.46□□□□□ -0.41
ATXN3-201ENST00000340660 HIVEP1P15822 2718 aa12.46□□□□□ -0.42
ATXN3-201ENST00000340660 MYO16Q9Y6X6 1858 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 SPG11Q96JI7 2443 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 ANTXRLA6NF34 631 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 IGHA1P01876 353 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 ITGB6P18564 788 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 ACTN2P35609 894 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 EPHA5P54756 1037 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 EPHA4P54764 986 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 PLEKHG6Q3KR16 790 aa12.45□□□□□ -0.42
ATXN3-201ENST00000340660 LMBRD2Q68DH5 695 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms