RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 EIF2AK2P19525 551 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 BGNP21810 368 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 GCAP28676 217 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ADSSP30520 456 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 KLHL38Q2WGJ6 581 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 C12orf56Q8IXR9 622 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 PDIK1LQ8N165 341 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CCDC110Q8TBZ0 833 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 SENP7Q9BQF6 1050 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CHMP2BQ9UQN3 213 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CCDC195A0A1B0GUA6 201 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MAGEA13PA6NCF6 341 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 LGR5O75473 907 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 VIL1P09327 827 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 FGFR1P11362 822 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ITGB5P18084 799 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 NPTX2P47972 431 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 LIG4P49917 911 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 RAB27AP51159 221 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MAMLD1Q13495 774 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MTMR1Q13613 665 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 TTC7BQ86TV6 843 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 NLRX1Q86UT6 975 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 GPD1LQ8N335 351 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 FBXO36Q8NEA4 188 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 FEZF2Q8TBJ5 459 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MCEEQ96PE7 176 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 STRA6Q9BX79 667 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 TMOD2Q9NZR1 351 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MARCOQ9UEW3 520 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 IP6K2Q9UHH9 426 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 MTO1Q9Y2Z2 717 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 IVNS1ABPQ9Y6Y0 642 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ARHGAP42A6NI28 874 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 OPHN1O60890 802 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CFHP08603 1231 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 GLRA2P23416 452 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 DSG3P32926 999 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 RPL7AP62424 266 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 ANKS1BQ7Z6G8 1248 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 TDRPQ86YL5 185 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 EGFL6Q8IUX8 553 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CCNJLQ8IV13 435 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 APLFQ8IW19 511 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 SP8Q8IXZ3 490 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 PPP1R14CQ8TAE6 165 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 PARVAQ9NVD7 372 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 RPL26L1Q9UNX3 145 aaKnown RBP11.72□□□□□ -0.53
PTPN7-201ENST00000309017 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 FCHO1O14526 889 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 HLA-DRAP01903 254 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
PTPN7-201ENST00000309017 TCF4P15884 667 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 LRRC36Q1X8D7 754 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 SMTNL2Q2TAL5 461 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 C1orf146Q5VVC0 180 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 RINLQ6ZS11 566 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 RGS9BPQ6ZS82 235 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 ALLCQ8N6M5 410 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-201ENST00000309017 THTPAQ9BU02 230 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 EURLQ9NYK6 297 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 MYPNQ86TC9 1320 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 ALOX15BO15296 676 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 TYROBPO43914 113 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 GSTA2P09210 222 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 HSPA1LP34931 641 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 ACOT2P49753 483 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 JAG1P78504 1218 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 TMPRSS15P98073 1019 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 CDK16Q00536 496 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 GCNT1Q02742 428 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 CUL3Q13618 768 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 RASA2Q15283 850 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-201ENST00000309017 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 NDE1Q9NXR1 346 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 LNPEPQ9UIQ6 1025 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
PTPN7-201ENST00000309017 ATRNL1Q5VV63 1379 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.54
PTPN7-201ENST00000309017 GAD2Q05329 585 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms