RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 HAPLN2Q9GZV7 340 aa17.07■□□□□ 0.32
LONRF3-201ENST00000304778 MROH7Q68CQ1 1323 aa17.07■□□□□ 0.32
LONRF3-201ENST00000304778 K7ERI5 159 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 ABCD1P33897 745 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 CCNG1P51959 295 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 LMBRD2Q68DH5 695 aaPredicted RBP17.06■□□□□ 0.32
LONRF3-201ENST00000304778 GALNT15Q8N3T1 639 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 PI4K2AQ9BTU6 479 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 SNX3O60493 162 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 GAS8O95995 478 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 ACOT2P49753 483 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 WNT7BP56706 349 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 NLRP11P59045 1033 aaKnown RBP17.06■□□□□ 0.32
LONRF3-201ENST00000304778 MCOLN2Q8IZK6 566 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 B4GALNT2Q8NHY0 566 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 DYDC1Q8WWB3 177 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 EPAS1Q99814 870 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 ARHGEF3Q9NR81 526 aa17.06■□□□□ 0.32
LONRF3-201ENST00000304778 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
LONRF3-201ENST00000304778 A0A1B0GVG6 124 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 TTC4O95801 387 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 OAS1P00973 400 aaKnown RBP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 PCK1P35558 622 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 RFC5P40937 340 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 SLC1A1P43005 524 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 GALNTL6Q49A17 601 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 MMP19Q99542 508 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 HERPUD2Q9BSE4 406 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 DCLK3Q9C098 648 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 STYXL1Q9Y6J8 313 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 TMEM120BA0PK00 339 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 CALCAP01258 141 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 EDN1P05305 212 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 OSBPP22059 807 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 MARK3P27448 753 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 ITGA8P53708 1063 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 CAV1Q03135 178 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 BNIP1Q12981 228 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 VSTM1Q6UX27 236 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
LONRF3-201ENST00000304778 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 NKX1-2Q9UD57 310 aaPredicted RBP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
LONRF3-201ENST00000304778 ATF2P15336 505 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 ENPEPQ07075 957 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 KCTD2Q14681 263 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 FASTKD5Q7L8L6 764 aaKnown RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 SYT15Q9BQS2 421 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 KIAA1586Q9HCI6 787 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 ZMYND8Q9ULU4 1186 aaPredicted RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 RRM1P23921 792 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 GJA5P36382 358 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 CAPSQ13938 189 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 MTHFD1LQ6UB35 978 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 ZNF677Q86XU0 584 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 RMDN2Q96LZ7 410 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 C1orf112Q9NSG2 853 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 RANBP1P43487 201 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 PSMD6Q15008 389 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 NUGGCQ68CJ6 796 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 C15orf39Q6ZRI6 1047 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 KCNN1Q92952 543 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 FNBP1Q96RU3 617 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
LONRF3-201ENST00000304778 GPR20Q99678 358 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 ANKFY1Q9P2R3 1169 aa17.04■□□□□ 0.32
LONRF3-201ENST00000304778 MAFO75444 373 aaPredicted RBP17.03■□□□□ 0.32
LONRF3-201ENST00000304778 RNF8O76064 485 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 PIGRP01833 764 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 TNNI1P19237 187 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 CENPCQ03188 943 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 MPP2Q14168 576 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 TRIP13Q15645 432 aaPredicted RBP17.03■□□□□ 0.32
LONRF3-201ENST00000304778 FBXO16Q8IX29 292 aaPredicted RBP17.03■□□□□ 0.32
LONRF3-201ENST00000304778 LMNTD2Q8IXW0 634 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 FITM2Q8N6M3 262 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 TBK1Q9UHD2 729 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 THAP12O43422 761 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 TCEA3O75764 348 aa17.03■□□□□ 0.32
LONRF3-201ENST00000304778 CLDN10P78369 228 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms