RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MARCH10Q8NA82 808 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SNX19Q92543 992 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RBBP8Q99708 897 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ISCUQ9H1K1 167 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CHST12Q9NRB3 414 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SORCS3Q9UPU3 1222 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HPSEQ9Y251 543 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SPACA6W5XKT8 324 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF18P17022 549 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ITGB6P18564 788 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RRM1P23921 792 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 EIF3EP60228 445 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GPS1Q13098 491 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DAB2IPQ5VWQ8 1189 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KRT80Q6KB66 452 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 METTL16Q86W50 562 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 STK40Q8N2I9 435 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 WDR18Q9BV38 432 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RGPD8O14715 1765 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SLIT2O94813 1529 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 A0A1W2PQ67 120 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SCARF1Q14162 830 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZDHHC20Q5W0Z9 365 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SCARA3Q6AZY7 606 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CENPPQ6IPU0 288 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MRNIPQ6NTE8 343 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 USP17L6PQ6QN14 398 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SPATA4Q8NEY3 305 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ATP8B4Q8TF62 1192 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 IL1RAPL1Q9NZN1 696 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FAM47DPA6NHR8 397 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RPS6KA5O75582 802 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FAM163BP0C2L3 166 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 NUDCD3Q8IVD9 361 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FEZF2Q8TBJ5 459 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 HEXDCQ8WVB3 486 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MTG1Q9BT17 334 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 BAIAP2L1Q9UHR4 511 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZFP69BQ9UJL9 534 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GRIN2DO15399 1336 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SNRPAP09012 282 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GRK2P25098 689 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CDH6P55285 790 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TFDP3Q5H9I0 405 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RASGRP4Q8TDF6 673 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 VPS50Q96JG6 964 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 REEP2Q9BRK0 252 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ADGRE3Q9BY15 652 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 JMJD4Q9H9V9 463 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PTPN22Q9Y2R2 807 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KDM3BQ7LBC6 1761 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 TTC26A0AVF1 554 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GYG2O15488 501 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 OPHN1O60890 802 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RBP1P09455 135 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 RPL9P32969 192 aaKnown RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CLCN6P51797 869 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ITIH4Q14624 930 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 LZICQ8WZA0 190 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.51□□□□□ -1.699e-8■■■□□ 18.8
VPS13C-202ENST00000261517 AIPL1Q9NZN9 384 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FAM50BQ9Y247 325 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MYH1P12882 1939 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FGF10O15520 208 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 LYPLA2O95372 231 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 GCLMP48507 274 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 CUL2Q13617 745 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 FAM83EQ2M2I3 478 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 AGAP9Q5VTM2 703 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 OLFML2BQ68BL8 750 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZBTB33Q86T24 672 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 MTMR14Q8NCE2 650 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 SPDYE1Q8NFV5 336 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ARMC7Q9H6L4 198 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 KCNH7Q9NS40 1196 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 PKP3Q9Y446 797 aa4.51□□□□□ -1.69
VPS13C-202ENST00000261517 ZSCAN5CA6NGD5 496 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 CLASP2O75122 1294 aaKnown RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 SOAT2O75908 522 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 CDK7P50613 346 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF268Q14587 947 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 ZKSCAN8Q15776 578 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 NKX2-3Q8TAU0 364 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 TFB1MQ8WVM0 346 aaKnown RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 HPDLQ96IR7 371 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 MAML3Q96JK9 1138 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 EPN3Q9H201 632 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 FAM217BQ9NTX9 383 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 PLIN4Q96Q06 1357 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 CNTNAP2Q9UHC6 1331 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 C2orf81A6NN90 581 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 RNASEH1O60930 286 aaKnown RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 KRT8P05787 483 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 NFX1Q12986 1120 aaKnown RBP4.5□□□□□ -1.69
VPS13C-202ENST00000261517 KLHDC7AQ5VTJ3 777 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF280DQ6N043 979 aa4.5□□□□□ -1.69
VPS13C-202ENST00000261517 PIGOQ8TEQ8 1089 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms