RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GOLPH3Q9H4A6 298 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 TCP11X1B4DZS4 312 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 CFAP99D6REC4 459 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 ATMINO43313 823 aaPredicted RBP19.81■□□□□ 0.76
PTPRE-201ENST00000254667 TGFB3P10600 412 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 EEF1DP29692 281 aaKnown RBP19.81■□□□□ 0.76
PTPRE-201ENST00000254667 FDFT1P37268 417 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 PEX19P40855 299 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 FKBP1AP62942 108 aaKnown RBP19.81■□□□□ 0.76
PTPRE-201ENST00000254667 PTK6Q13882 451 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 FRMD3A2A2Y4 597 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 F9P00740 461 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 THPOP40225 353 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 PTK7Q13308 1070 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 C9orf131Q5VYM1 1079 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 METTL7BQ6UX53 244 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 MYO1CO00159 1063 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 ZNF263O14978 683 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 ANXA9O76027 345 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 KRT4P19013 534 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 RGS4P49798 205 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 SLC13A5Q86YT5 568 aaPredicted RBP19.81■□□□□ 0.76
PTPRE-201ENST00000254667 SYTL5Q8TDW5 730 aaPredicted RBP19.81■□□□□ 0.76
PTPRE-201ENST00000254667 EPN3Q9H201 632 aa19.81■□□□□ 0.76
PTPRE-201ENST00000254667 GZMAP12544 262 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 OAZ1P54368 228 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 SMAD1Q15797 465 aaKnown RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 TTI2Q6NXR4 508 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 GJB7Q6PEY0 223 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ANKS3Q6ZW76 656 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 CBWD2Q8IUF1 395 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 PCSK9Q8NBP7 692 aaKnown RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 C20orf96Q9NUD7 363 aaPredicted RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 CHMP2BQ9UQN3 213 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 SNX5Q9Y5X3 404 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 BCL9O00512 1426 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 RSPH10B2B2RC85 870 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 RSPH10BP0C881 870 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 CASP7P55210 303 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 GUCY1A3Q02108 690 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 PRUNE1Q86TP1 453 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 PRMT1Q99873 361 aaKnown RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ANGPT2O15123 496 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 AKT1P31749 480 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ATICP31939 592 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ITGA8P53708 1063 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 LONRF1Q17RB8 773 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ARHGAP15Q53QZ3 475 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 C10orf120Q5SQS8 335 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ZNF720Q7Z2F6 126 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 VPS9D1Q9Y2B5 631 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ASMTLO95671 621 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ALDH7A1P49419 539 aaKnown RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 NTRK3Q16288 839 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 TTC39BQ5VTQ0 682 aaPredicted RBP19.8■□□□□ 0.76
PTPRE-201ENST00000254667 ADGRA1Q86SQ6 560 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 WDR49Q8IV35 697 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 OLFML3Q9NRN5 406 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 DSEQ9UL01 958 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 SALL3Q9BXA9 1300 aa19.8■□□□□ 0.76
PTPRE-201ENST00000254667 IL10P22301 178 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CUL3Q13618 768 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 C3orf62Q6ZUJ4 267 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 TFB1MQ8WVM0 346 aaKnown RBP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 THAP2Q9H0W7 228 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CYP3A43Q9HB55 503 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 GBA2Q9HCG7 927 aaPredicted RBP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 GPRC5CQ9NQ84 441 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 VWDEQ8N2E2 1590 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 GOLGA8RI6L899 631 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CHN1P15882 459 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 PTGER2P43116 358 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CENPPQ6IPU0 288 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 FOXN3O00409 490 aaPredicted RBP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 PDK2Q15119 407 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 MTFR1Q15390 333 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CYP4A22Q5TCH4 519 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 NIPA1Q7RTP0 329 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 GTPBP10A4D1E9 387 aaKnown RBP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CXCL11O14625 94 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 KRT16P08779 473 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 MYL2P10916 166 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 DSG3P32926 999 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 CLCN3P51790 818 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 HIC1Q14526 733 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 EPC2Q52LR7 807 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 USP13Q92995 863 aaPredicted RBP19.79■□□□□ 0.76
PTPRE-201ENST00000254667 TASP1Q9H6P5 420 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 GRID1Q9ULK0 1009 aa19.79■□□□□ 0.76
PTPRE-201ENST00000254667 SHMT1P34896 483 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CCDC15Q0P6D6 951 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CATSPER1Q8NEC5 780 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CEP19Q96LK0 163 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CYP4F11Q9HBI6 524 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 ZCCHC17Q9NP64 241 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 KIF17Q9P2E2 1029 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 PRPF4O43172 522 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 LSM8O95777 96 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 HOXC6P09630 235 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms