RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 RNF220Q5VTB9 566 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 MAD1L1Q9Y6D9 718 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PFASO15067 1338 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PSAPP07602 524 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 NCF2P19878 526 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 ANXA13P27216 316 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TNFSF9P41273 254 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 BTKQ06187 659 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PDIA2Q13087 525 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 ORC2Q13416 577 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 GLRA4Q5JXX5 417 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 CWF19L1Q69YN2 538 aaKnown RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 SCARA3Q6AZY7 606 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TRIM42Q8IWZ5 723 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 LRGUKQ96M69 825 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
SOX9-201ENST00000245479 SENP1Q9P0U3 644 aa12.12□□□□□ -0.47
SOX9-201ENST00000245479 PTPN4P29074 926 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 GTF2H1P32780 548 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 TTC25Q96NG3 672 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 CES2O00748 559 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 GSTT1P30711 240 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 MMP13P45452 471 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 BAG6P46379 1132 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 EML3Q32P44 896 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 IZUMO2Q6UXV1 221 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 CRLF3Q8IUI8 442 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 FAM81AQ8TBF8 368 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 TBC1D22BQ9NU19 505 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 COPEO14579 308 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 RTN2O75298 545 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 ATP6V1B1P15313 513 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 TRIP10Q15642 601 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 P3H1Q32P28 736 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 WASHC2DQ5SRD0 308 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 OR5B17Q8NGF7 314 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
SOX9-201ENST00000245479 GORASP1Q9BQQ3 440 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 MYH3P11055 1940 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
SOX9-201ENST00000245479 LPXNO60711 386 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOX9-201ENST00000245479 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 ESRRGP62508 458 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 ASPHQ12797 758 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 RFX6Q8HWS3 928 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 HEXIM2Q96MH2 286 aaKnown RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 TMEM121Q9BTD3 319 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 MARCOQ9UEW3 520 aaPredicted RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
SOX9-201ENST00000245479 CSADQ9Y600 493 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 H7C0C1 242 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 CFLARO15519 480 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 ZNF862O60290 1169 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 FAM200BP0CF97 657 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 MX2P20592 715 aa12.1□□□□□ -0.47
SOX9-201ENST00000245479 MAGEA4P43358 317 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms