RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 SLC4A1P02730 911 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 AKR1B1P15121 316 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 EIF2B2P49770 351 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 ABCE1P61221 599 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 XRCC4Q13426 336 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 DHX35Q9H5Z1 703 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 CNGA2Q16280 664 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 BNC2Q6ZN30 1099 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 ZNF662Q6ZS27 426 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 NUP93Q8N1F7 819 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 ASPSCR1Q9BZE9 553 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 FCHO1O14526 889 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 SNX2O60749 519 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 SRGAP2CP0DJJ0 459 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 BGNP21810 368 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 DAGLBQ8NCG7 672 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 CKAP2Q8WWK9 683 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 PAFAH2Q99487 392 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 PAIP1Q9H074 479 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 PCDHB2Q9Y5E7 798 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 SF3B3Q15393 1217 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 ZC2HC1CQ53FD0 456 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 RC3H1Q5TC82 1133 aaKnown RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 RNF43Q68DV7 783 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 FSD1LQ9BXM9 530 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 ZNF341Q9BYN7 854 aa14.41□□□□□ -0.1
HCFC2-201ENST00000229330 CEP170BQ9Y4F5 1589 aaPredicted RBP14.41□□□□□ -0.1
HCFC2-201ENST00000229330 FAM237AA0A1B0GTK4 181 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ZNF839A8K0R7 811 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CST8O60676 142 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 DLGAP3O95886 979 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ASNSP08243 561 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 MLH1P40692 756 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 OTUD4Q01804 1114 aaKnown RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 PDAP1Q13442 181 aaKnown RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 TRIM60Q495X7 471 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ITPRIPL1Q6GPH6 555 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ACAD10Q6JQN1 1059 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 PGBD4Q96DM1 585 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 BRD8Q9H0E9 1235 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 MMADHCQ9H3L0 296 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 PSTPIP1O43586 416 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ALBP02768 609 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ATP1A4Q13733 1029 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CCDC103Q8IW40 242 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 FBXO36Q8NEA4 188 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ABLIM1O14639 778 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 WDR47O94967 919 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 NSUN2Q08J23 767 aaKnown RBP eCLIP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 IFNEQ86WN2 208 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 SP8Q8IXZ3 490 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 FRMD8Q9BZ67 464 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 TASP1Q9H6P5 420 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ZBTB39O15060 712 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 GYS1P13807 737 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 TROAPQ12815 778 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 SBK1Q52WX2 424 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ARMCX2Q7L311 632 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CROCCP3Q8IVE0 287 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CDC26Q8NHZ8 85 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 AKT3Q9Y243 479 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 TBX3O15119 743 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 ATP9BO43861 1147 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 RBP3P10745 1247 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 SPRP35270 261 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CLK1P49759 484 aaKnown RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 RIPK1Q13546 671 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 PID1Q7Z2X4 250 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 SPATA18Q8TC71 538 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
HCFC2-201ENST00000229330 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
HCFC2-201ENST00000229330 GPC3P51654 580 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 MAP3K10Q02779 954 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 FOXD4Q12950 439 aaPredicted RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 OR6B3Q8NGW1 331 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 KAT2BQ92831 832 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 PNMA3Q9UL41 463 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 SNX13Q9Y5W8 968 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 KCTD21Q4G0X4 260 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 CWF19L1Q69YN2 538 aaKnown RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 ZNF677Q86XU0 584 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 EFCAB1Q9HAE3 211 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 ABL1P00519 1130 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 OCM2P0CE71 109 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 OCMP0CE72 109 aaPredicted RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 VCAM1P19320 739 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
HCFC2-201ENST00000229330 C11orf63Q6NUN7 778 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
HCFC2-201ENST00000229330 DUSP9Q99956 384 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms