RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Cplx3Q8R1B5 158 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 SncbQ91ZZ3 133 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Rin1Q921Q7 763 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Q9CQC3 228 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Fgfr1op2Q9CRA9 253 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 PrccQ9EQC8 491 aaKnown RBP16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Rgs17Q9QZB0 210 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Magea2Q9R2A2 320 aa16.46■□□□□ 0.23
Sdc1-205ENSMUST00000171158 Rap1gapA2ALS5 663 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Tubb1A2AQ07 451 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gm16430A6X8J1 155 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Zfp839E9PUU5 921 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Fgf15O35622 218 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Pde1bQ01065 535 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Slc10a4Q3UEZ8 437 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Elf3Q3UPW2 391 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Syn2Q64332 586 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Syt15Q8C6N3 418 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lamtor4Q8CF66 99 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Cog3Q8CI04 820 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Trim60Q8VI40 466 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Smyd3Q9CWR2 428 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Slxl1Q9D515 155 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 B4galt5Q9JMK0 388 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Clec4aQ9QZ15 238 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Diaph3Q9Z207 1171 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Cdr2lA2A6T1 465 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Bfsp1A2AMT1 669 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Zfp212G3X8R7 492 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Rab20P35295 233 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Nr2c2P49117 596 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 GckP52792 465 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Runx2Q08775 607 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Cdca2Q14B71 982 aaKnown RBP16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gbp8Q2V6D6 525 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Mical2Q8BML1 960 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Qsox1Q8BND5 748 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Smtnl2Q8CI12 456 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Upb1Q8VC97 393 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Epn3Q91W69 636 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 NcaldQ91X97 193 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Nek8Q91ZR4 698 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Golga1Q9CW79 758 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Clcn2Q9R0A1 908 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Sgk1Q9WVC6 431 aa16.45■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lonrf2B2RT44 518 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Tatdn2B7ZNL9 783 aaKnown RBP16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gm3460E9QAI8 215 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Capn6O35646 641 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 IapP03975 557 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Tnnc2P20801 160 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Sar1aP36536 198 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ndufs6P52503 116 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lhx5P61375 402 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 LbpQ61805 481 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Phka2Q8BWJ3 1235 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Dclre1bQ8C7W7 541 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 UvragQ8K245 698 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Plcb4Q91UZ1 1175 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Fam212aQ9CX62 282 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Nup210lQ9D2F7 1881 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ccdc152E9PX14 254 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Banf1O54962 89 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Prom1O54990 867 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Tlk2O55047 718 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 MycnP03966 462 aaKnown RBP16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 YwhaeP62259 255 aaKnown RBP16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lig3P97386 1015 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lrch2Q3UMG5 773 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ttc9Q3V038 219 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 SkiQ60698 725 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 HpseQ6YGZ1 535 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Q8BZE1 841 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Stxbp5Q8K400 1152 aaKnown RBP16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Trpc2Q9R244 1172 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ggps1Q9WTN0 300 aa16.44■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Apol8A2VDH7 339 aaKnown RBP16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 1700064H15RikD3Z4D4 81 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Mroh5E9PUJ8 762 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Adgrf2E9Q4J9 644 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Rag1P15919 1040 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Fgfr1P16092 822 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Casp4P70343 373 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Tmem45aQ60774 273 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ubap1Q8BH48 502 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Fbxo44Q8BK26 255 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Zfp449Q8CB76 518 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Q8CD60 292 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gpc3Q8CFZ4 579 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Nr1h3Q9Z0Y9 445 aa16.43■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Robo3Q9Z2I4 1366 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gm12394A2AKP6 982 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 DffaO54786 331 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Snx3O70492 162 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 FlgP11088 336 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Gad2P48320 585 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Rfx2P48379 717 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Lrch1P62046 709 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 FaxcQ3UMF9 409 aa16.42■□□□□ 0.22
Sdc1-205ENSMUST00000171158 Ifnl2Q4VK74 193 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms