RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Ssc5dQ8BV57 1371 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Sult1e1P49891 295 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Gm42417Q8K1D0 126 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Slc5a5Q99PN0 618 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Irx4Q9QY61 515 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 XdhQ00519 1335 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Sdr16c6Q05A13 316 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mansc4Q3UU94 337 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Sf3b3Q921M3 1217 aaKnown RBP19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Fam111aQ9D2L9 613 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Rhobtb1Q9DAK3 695 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 Slc12a4Q9JIS8 1085 aa19.29■□□□□ 0.68
Sort1-203ENSMUST00000135636 1700031M16RikA0A087WSH0 82 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 1700024B05RikE9Q6D7 167 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Gm5152L7N200 190 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Adam7O35227 789 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 VclQ64727 1066 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Tmc8Q7TN58 722 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mageb18Q8BQR7 327 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 PpatQ8CIH9 517 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mrps9Q9D7N3 390 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Orc3Q9JK30 715 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Nckap1P28660 1128 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 AurkaP97477 395 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Plpp4Q0VBU9 271 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Apol7eQ3UZ24 369 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Atg9bQ6EBV9 922 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Csde1Q91W50 798 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Alpk1Q9CXB8 1231 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Gm8897L7N294 181 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 ArP19091 899 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Tlx1P43345 332 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Syt2P46097 422 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Rad51Q08297 339 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Faf2Q3TDN2 445 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Stard3Q61542 446 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 RhocQ62159 193 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Rbmx2Q8R0F5 326 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Vmn2r100E9QAZ9 850 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Casp4P70343 373 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Grik1Q60934 836 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 MarsQ68FL6 902 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Dyrk4Q8BI55 632 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Kctd17E0CYQ0 296 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Slc7a1Q09143 622 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Q9D2Q3 444 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Gstt4Q9D4P7 240 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 PnkpQ9JLV6 522 aaKnown RBP19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Ripor3A1L3T7 938 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 CercamA3KGW5 592 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Gm6133B2RY53 190 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Wee2Q66JT0 555 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Robo4Q8C310 1012 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 LgsnQ8CIX8 563 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Q91WD4 421 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Kif19Q99PT9 997 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 Itsn2Q9Z0R6 1659 aa19.28■□□□□ 0.68
Sort1-203ENSMUST00000135636 NntQ61941 1086 aaKnown RBP19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Nlrp9bQ66X22 1003 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Fam149b1Q6NSV7 578 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Nipsnap3bQ9CQE1 247 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 MymkQ9D1N4 221 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mxra8Q9DBV4 442 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Trp53inp1Q9QXE4 239 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Oas1eA0A0J9YV76 386 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Wdr72D3YYM4 1114 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 PtpreP49446 699 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Pabpc4Q6PHQ9 660 aaKnown RBP19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 ArpinQ9D0A3 226 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Nphs1Q9QZS7 1256 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Irf1P15314 329 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Psmc6P62334 389 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Etf1Q8BWY3 437 aaKnown RBP19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mettl13Q91YR5 698 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Trappc11B2RXC1 1133 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mroh4G3X8W1 983 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Ccr1P51675 355 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Cyp2c54Q6XVG2 490 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Mrpl47Q8K2Y7 252 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 AdarQ99MU3 1178 aaKnown RBP19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Ranbp17Q99NF8 1088 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 Lpin2Q99PI5 893 aa19.27■□□□□ 0.68
Sort1-203ENSMUST00000135636 SprtnG3X912 497 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tmem199Q5SYH2 208 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tmem154Q8C4Q9 181 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zbtb8bQ8CII0 484 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ttc4Q8R3H9 386 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Utp6Q8VCY6 597 aaKnown RBP19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 MbipQ99LQ1 341 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 3830403N18RikQ9D6C3 208 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cul3Q9JLV5 768 aa19.27■□□□□ 0.67
Sort1-203ENSMUST00000135636 MetP16056 1379 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gm6408J3QNG1 320 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 FynP39688 537 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 InaP46660 501 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Scd4Q6T707 353 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 HpgdQ8VCC1 269 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 TraipQ8VIG6 470 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Nt5c3aQ9D020 331 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ifi206G3UZV2 921 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms