RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Sept11Q8C1B7 431 aaKnown RBP16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Strip2Q8C9H6 844 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Gga1Q8R0H9 635 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Tm9sf1Q9DBU0 606 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 HemgnQ9ERZ0 503 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Tfr2Q9JKX3 798 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Krt16Q9Z2K1 469 aa16.58■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Gsg1l2M0QWL6 290 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Map4k1P70218 827 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Atxn2lQ7TQH0 1049 aaKnown RBP16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zswim6Q80TB7 1207 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ugp2Q91ZJ5 508 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Msi2Q920Q6 346 aaKnown RBP16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ppp1r3aQ99MR9 1089 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Pex5O09012 639 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 ChrngP04760 519 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 PdgfraP26618 1089 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Vps4bP46467 444 aaKnown RBP16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Etv6P97360 485 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 DselQ0VBN2 1207 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Khdrbs1Q60749 443 aaKnown RBP16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Lars2Q8VDC0 902 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Nmd3Q99L48 503 aaKnown RBP16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 PudpQ9D5U5 234 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Soat2O88908 525 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 CblP22682 913 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ces1cP23953 554 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Actr2P61161 394 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ppp3caP63328 521 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Nt5c2Q3V1L4 560 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Fam160a1Q505K2 1081 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Stxbp2Q64324 593 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ccdc28bQ8CEG5 200 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Cd248Q91V98 765 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Pip4k2cQ91XU3 421 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Actrt1Q9D9J3 376 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Map7d3A2AEY4 876 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zfp558E9Q1J0 407 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Cdk14O35495 469 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Scg3P47867 471 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Polr1bP70700 1135 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Akap7Q7TN79 314 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Caskin2Q8VHK1 1201 aa16.57■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Astn1Q61137 1302 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Unc13dB2RUP2 1085 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Spin2fJ3QPU0 254 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Mmp13P33435 472 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 HalP35492 657 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Mxi1P50540 228 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 NfiaQ02780 532 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zcwpw1Q6IR42 630 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Raver2Q7TPD6 673 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Lgr5Q9Z1P4 907 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zscan4-ps1A0A1C7CYV3 506 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zscan4dA7KBS4 506 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Bmpr2O35607 1038 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Samd11Q1RNF8 542 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Phactr1Q2M3X8 580 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Cul4aQ3TCH7 759 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zscan4fQ3URS2 506 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Tmc3Q7TQ69 1130 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zscan4cQ80VJ6 506 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ece2Q80Z60 881 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Wdr35Q8BND3 1181 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Pcdhb7Q8CDY9 829 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Jph2Q9ET78 696 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Prdm2A2A7B5 1709 aaKnown RBP16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ahnak2E9PYB0 1738 aaKnown RBP16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Shoc2O88520 582 aaKnown RBP16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Mup5P11591 180 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Rmdn3Q3UJU9 470 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Rab3ipQ68EF0 428 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Fbxo28Q8BIG4 368 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Slc9b1Q8C0X2 565 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ap3m2Q8R2R9 418 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Homer3Q99JP6 356 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Prpsap1Q9D0M1 356 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ccdc70Q9D9B0 223 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Myo5bP21271 1818 aa16.56■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Ttc30a2A2AKQ8 664 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Gcnt4E9Q649 455 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 E330034G19RikQ3UWX6 351 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Kctd8Q50H33 476 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Zfp418Q8BFS8 652 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Krt75Q8BGZ7 551 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Olfml3Q8BK62 406 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Gprc5cQ8K3J9 440 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Agap3Q8VHH5 910 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Atp8b4A2ANX3 1194 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Morc3F7BJB9 942 aaKnown RBP16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 VcpQ01853 806 aaKnown RBP16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 ZufspQ3T9Z9 577 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Parp6Q6P6P7 630 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Alkbh8Q80Y20 664 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Vmn2r63E9Q0K5 859 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Gm9268E9Q0M3 861 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Vmn2r62K7N712 859 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Rtn2O70622 471 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Rab21P35282 222 aa16.55■□□□□ 0.24
Sptbn4-204ENSMUST00000108364 Hspa8P63017 646 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms