RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Lhx5P61375 402 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Nr1d1Q3UV55 615 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ndufaf2Q59J78 168 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Kbtbd3Q8BHI4 607 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mical2Q8BML1 960 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Smg8Q8VE18 991 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Setd3Q91WC0 594 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fkbp6Q91XW8 327 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 RragcQ99K70 398 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm3404Q9D506 307 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cpb2Q9JHH6 422 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Extl1Q9JKV7 669 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 PfkpQ9WUA3 784 aaKnown RBP13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Col5a3Q9JLI2 1739 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lrrc74aA0A1Y7VMD6 494 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 March10E9PX79 788 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 JchainP01592 159 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gnrh1P13562 90 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Itgb7P26011 806 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ctnna1P26231 906 aaKnown RBP13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Usp4P35123 962 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Foxp2P58463 714 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Prdx5P99029 210 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ano7Q14AT5 859 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ccdc114Q3UX62 658 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Elf1Q60775 612 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lilrb4Q64281 335 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tcaf3Q6QR59 914 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 C130026I21RikQ8C898 291 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Actl9Q8CG27 415 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 CmasQ99KK2 432 aaKnown RBP13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Abcf2Q99LE6 628 aaKnown RBP13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Chst12Q99LL3 419 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lrrc71Q9D3W5 558 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tubgcp4Q9D4F8 667 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rnf19bA2A7Q9 732 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Prdm15E9Q8T2 1174 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tspyl1O88852 379 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ttc9Q3V038 219 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ctnna2Q61301 953 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Olfr670Q7TRP3 312 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 FtoQ8BGW1 502 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Uba3Q8C878 462 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ugt3a2Q8JZZ0 523 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Med7Q9CZB6 233 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ap1g2O88512 791 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 RalaP63321 206 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Six1Q62231 284 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tbc1d10bQ8BHL3 798 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rsad2Q8CBB9 362 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cd300ldQ8VCH2 221 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Alg1Q921Q3 482 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Thumpd2Q9CZB3 528 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gstt4Q9D4P7 240 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Alg13Q9D8C3 1166 aaKnown RBP13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fam122aQ9DB52 284 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rdh14Q9ERI6 334 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 B4galt4Q9JJ04 344 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ptgdr2Q9Z2J6 382 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm4788E9Q8B5 879 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Vmn2r1O70410 912 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ptpn11P35235 597 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cracr2aQ3UP38 310 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Znf235Q61116 645 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Has1Q61647 583 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Skiv2lQ6NZR5 1244 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gpatch2lQ6PE65 482 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 2700097O09RikQ6PGK3 301 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 MogsQ80UM7 834 aaKnown RBP13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gpc3Q8CFZ4 579 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 TraipQ8VIG6 470 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gimap4Q99JY3 219 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cul2Q9D4H8 745 aa13.1□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ms4a4aA0A087WRT7 236 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ms4a14A0A087WSD2 1232 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Vmn2r121A2BE32 847 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm3252E9PUT9 216 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm3468E9QAJ8 216 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 EnahQ03173 802 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ntrk3Q6VNS1 825 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 SowahaQ8BLS7 548 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Aldh5a1Q8BWF0 523 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Q8CCC3 530 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Smtnl2Q8CI12 456 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Olfr1502Q8VG66 316 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Egfl7Q9QXT5 275 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 CtsfQ9R013 462 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 SktA2AQ25 1946 aaKnown RBP13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 1700031M16RikA0A087WSH0 82 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Wee1P47810 646 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Pcsk1P63239 753 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Zscan2Q07230 614 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Bbof1Q3V079 533 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mysm1Q69Z66 819 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Reps2Q80XA6 521 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Aste1Q8BIR2 672 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ccdc15Q8C9M2 810 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gpc5Q8CAL5 572 aa13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lonp1Q8CGK3 949 aaKnown RBP13.09□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rnf135Q9CWS1 417 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 71.7 ms