RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Elavl1P70372 326 aaKnown RBP8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 CpeQ00493 476 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Eml1Q05BC3 814 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Psg29Q3URN6 468 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gm813Q3UWK9 176 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 ItgadQ3V0T4 1168 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Nxf2Q4ZGD8 691 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Fam83gQ5SWY7 812 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tcf4Q60722 670 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Nsun6Q7TS68 476 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pum1Q80U78 1189 aaKnown RBP8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Daam1Q8BPM0 1077 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Anapc5Q8BTZ4 740 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Fam161bQ8CB59 589 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Brd8Q8R3B7 951 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Kdm4cQ8VCD7 1054 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Kdm4bQ91VY5 1086 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pcdha12Q91Y18 950 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Hars2Q99KK9 505 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Mgst3Q9CPU4 153 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Dnaaf1Q9D2H9 634 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ndst3Q9EQH7 873 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 GlmpQ9JHJ3 404 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Cntn6Q9JMB8 1028 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Adamtsl1Q8BLI0 1745 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Klhl18A0A0G2JGN5 579 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ccdc149F6V035 524 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Hoxb7P09024 217 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 PtgirP43252 415 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pold1P52431 1105 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 CidecP56198 239 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Siah1aP61092 282 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Adcy8P97490 1249 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Trim67Q505D9 768 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 ErmnQ5EBJ4 281 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 GkQ64516 559 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 RgmbQ7TQ33 436 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Dnajc16Q80TN4 772 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tmem127Q8BGP5 238 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Hoxc12Q8K5B8 280 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Bbc3Q99ML1 193 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Cyp4f13Q99N19 523 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Fam187aQ9D3R5 417 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 OxsmQ9D404 459 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Dpp6Q9Z218 804 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Arfgef2A2A5R2 1792 aa8.3□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Vmn1r68E9Q0V3 319 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Evx1P23683 416 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ccr1P51675 355 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Psmc1P62192 440 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gdf10P97737 476 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tmprss11eQ5S248 423 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc5a6Q5U4D8 634 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 GcdhQ60759 438 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Vps72Q62481 368 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ppp1r9bQ6R891 817 aaKnown RBP8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tmem214Q8BM55 687 aaKnown RBP8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ppp1r3eQ8BRJ4 279 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ccser1Q8C0C4 895 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Lgi4Q8K1S1 537 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Rpl17Q9CPR4 184 aaKnown RBP8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 4931417E11RikQ9CR05 305 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Lce1bQ9D149 137 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gm3404Q9D506 307 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ctag2Q9D9S4 219 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 PalmQ9Z0P4 383 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Cacna2d3Q9Z1L5 1091 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Uhrf1bp1lA2RSJ4 1457 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gprasp1Q5U4C1 1347 aa8.29□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Smok4aA0JLX3 433 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Cpb1B2RS76 415 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Anxa2P07356 339 aaKnown RBP8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Hoxc9P09633 260 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 CrklP47941 303 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 RenbpP82343 430 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Cln6Q3U466 308 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gramd2aQ3V3G7 320 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 BadQ61337 204 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Nop58Q6DFW4 536 aaKnown RBP8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Rad17Q6NXW6 688 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ankle2Q6P1H6 964 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Sestd1Q80UK0 696 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tmem209Q8BRG8 561 aaKnown RBP8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Q8CDS7 251 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tp53inp2Q8CFU8 221 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ipo13Q8K0C1 963 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 OptnQ8K3K8 584 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Mthfd1Q922D8 935 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Q9D1Z2 194 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 2010005H15RikQ9D8D6 97 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 ChmQ9QXG2 665 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Prkab1Q9R078 270 aa8.28□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Adgrb1Q3UHD1 1582 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Mst1rQ62190 1378 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Plekhd1B2RPU2 505 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ccdc6D3YZP9 469 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gm3676D3Z236 184 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 AgrpP56473 131 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Vps33bP59016 617 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cct4P80315 539 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms