RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ttll3A4Q9E5 927 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gm4297D3YWB7 211 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Klrk1O54709 232 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Rfx2P48379 717 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 AcadsQ07417 412 aaKnown RBP12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gm29609Q3UU56 907 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Cnga4Q3UW12 575 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tigd5Q499M4 642 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Hbs1lQ69ZS7 682 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Sdccag8Q80UF4 717 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Nup93Q8BJ71 819 aaKnown RBP12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gtf3c2Q8BL74 907 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tbc1d17Q8BYH7 645 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Trim35Q8C006 501 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 CnstQ8CBC4 711 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 HscbQ8K3A0 234 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tbc1d22aQ8R5A6 516 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ifih1Q8R5F7 1025 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Stx18Q8VDS8 334 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Retreg1dQ8VE91 480 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 NpntQ91V88 561 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Terb2Q9D494 218 aa12.09□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Sh2d4bA6X942 431 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Galntl6E5D8G1 601 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 PtenO08586 403 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Pja1O55176 578 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Tmem102Q3UPR7 509 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Cnot7Q60809 285 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Exoc3l4Q6DIA2 721 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Znf365Q8BG89 408 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Thap3Q8BJ25 218 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Zcchc18Q8VD24 393 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Pdia5Q921X9 517 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Trpd52l3Q9CQ14 231 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Pole4Q9CQ36 118 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Fam71aB7XG49 585 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 VcpQ01853 806 aaKnown RBP12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 HexdcQ3U4H6 486 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Gm5935Q497S0 212 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Mief2Q5NCS9 454 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Fbxo28Q8BIG4 368 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Pkn2Q8BWW9 983 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Slc39a13Q8BZH0 361 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Clip4Q8CI96 704 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Pnpt1Q8K1R3 783 aaKnown RBP12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Bst2Q8R2Q8 172 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Klhl20Q8VCK5 604 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Snx9Q91VH2 595 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Nuf2Q99P69 463 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Q9CPZ3 230 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Atp5dQ9D3D9 168 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 CsadQ9DBE0 493 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Tor1aQ9ER39 333 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Tfr2Q9JKX3 798 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Spo11Q9WTK8 396 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Gm1661E9Q963 441 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Gm6614M0QWR8 670 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Il13ra2O88786 383 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Ephx2P34914 554 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Arl1P61211 181 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Psmc6P62334 389 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Psg29Q3URN6 468 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Lrig2Q52KR2 1054 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Ptger2Q62053 362 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Actn1Q7TPR4 892 aaKnown RBP12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Olfr813Q7TRH5 310 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Nrde2Q80XC6 1172 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Plpp6Q9D4F2 292 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Tmem79Q9D709 391 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Serpinb12Q9D7P9 423 aa12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Fxr2Q9WVR4 673 aaKnown RBP12.08□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Col1a1P11087 1453 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Ambra1A2AH22 1300 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Esp31A8R0W3 114 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Cyp2a22B2RXZ2 492 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 BrafP28028 804 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Meis2P97367 477 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Klrg2Q3UM83 387 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Gm10488Q4KL05 212 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Gm14819Q62478 212 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Jade1Q6ZPI0 834 aaKnown RBP12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Olfr792Q7TRH9 311 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Frmd4aQ8BIE6 1020 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Lrp2bpQ9D4C6 346 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Adamts6D3Z1A5 1117 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Igf2bp1O88477 577 aaKnown RBP12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Krt18P05784 423 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Hmgb2P30681 210 aaKnown RBP12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Polr2cP97760 275 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Zbtb16Q3UQ17 673 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Slc10a5Q5PT54 434 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Ptpn14Q62130 1189 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Insm1Q63ZV0 521 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 GartQ64737 1010 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Dhx37Q6NZL1 1150 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Usp6nlQ80XC3 819 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Cept1Q8BGS7 416 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Arhgap24Q8C4V1 747 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Panx3Q8CEG0 392 aa12.07□□□□□ -0.48
Sdc1-201ENSMUST00000020911 Depdc1aQ8CIG0 804 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms