RNA–Protein interactions for RNA: snR9

snR9, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR9, Length 187 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR9	snR9	PIR1	Q03178	341 aa		0.64	□□□□□ -2.31
snR9	snR9	MRPS17	Q03246	237 aa	Predicted RBP	0.64	□□□□□ -2.31
snR9	snR9	FYV12	Q08559	129 aa		0.64	□□□□□ -2.31
snR9	snR9	YGL235W	P53071	178 aa		0.63	□□□□□ -2.31
snR9	snR9	FIT1	Q04433	528 aa		0.63	□□□□□ -2.31
snR9	snR9	UPS1	Q05776	175 aa		0.63	□□□□□ -2.31
snR9	snR9	CCW12	Q12127	133 aa		0.63	□□□□□ -2.31
snR9	snR9	ATP20	Q12233	115 aa		0.63	□□□□□ -2.31
snR9	snR9	RPS24A	P0CX31	135 aa	Known RBP	0.62	□□□□□ -2.31
snR9	snR9	RPS24B	P0CX32	135 aa	Known RBP	0.62	□□□□□ -2.31
snR9	snR9	NSG1	P38837	291 aa		0.62	□□□□□ -2.31
snR9	snR9	YIL102C	P40488	101 aa		0.62	□□□□□ -2.31
snR9	snR9	NSE4	P43124	402 aa		0.62	□□□□□ -2.31
snR9	snR9	SBH2	P52871	88 aa		0.62	□□□□□ -2.31
snR9	snR9	RTC4	P53850	401 aa		0.62	□□□□□ -2.31
snR9	snR9	DAS2	Q12084	232 aa		0.62	□□□□□ -2.31
snR9	snR9	YLR412C-A	Q3E742	68 aa		0.62	□□□□□ -2.31
snR9	snR9	NTG1	P31378	399 aa		0.61	□□□□□ -2.31
snR9	snR9	YAR064W	P39563	99 aa		0.61	□□□□□ -2.31
snR9	snR9	NRK1	P53915	240 aa		0.61	□□□□□ -2.31
snR9	snR9	ELP6	Q04868	273 aa		0.61	□□□□□ -2.31
snR9	snR9	YOL024W	Q08172	172 aa		0.61	□□□□□ -2.31
snR9	snR9	FMP49	A0A023PZB3	126 aa		0.6	□□□□□ -2.31
snR9	snR9	ADE1	P27616	306 aa		0.6	□□□□□ -2.31
snR9	snR9	NSA2	P40078	261 aa	Known RBP	0.6	□□□□□ -2.31
snR9	snR9	DCV1	P43595	202 aa		0.6	□□□□□ -2.31
snR9	snR9	YHP1	Q04116	353 aa		0.6	□□□□□ -2.31
snR9	snR9	YOR342C	Q12182	319 aa		0.6	□□□□□ -2.31
snR9	snR9	DUR1,2	P32528	1835 aa	Known RBP	0.59	□□□□□ -2.31
snR9	snR9	YKT6	P36015	200 aa	Known RBP	0.59	□□□□□ -2.31
snR9	snR9	RRT1	P38192	103 aa		0.59	□□□□□ -2.31
snR9	snR9	PGA1	P53896	198 aa		0.59	□□□□□ -2.31
snR9	snR9	DML1	Q03652	475 aa		0.59	□□□□□ -2.31
snR9	snR9	DGK1	Q12382	290 aa		0.59	□□□□□ -2.31
snR9	snR9	YMR030W-A	Q3E760	96 aa		0.59	□□□□□ -2.31
snR9	snR9	YPR014C	Q6B0W2	109 aa		0.59	□□□□□ -2.31
snR9	snR9	JIP3	O13555	125 aa		0.58	□□□□□ -2.32
snR9	snR9	ATG41	Q12048	136 aa		0.58	□□□□□ -2.32
snR9	snR9	MAK31	P23059	88 aa		0.57	□□□□□ -2.32
snR9	snR9	SBH1	P52870	82 aa		0.57	□□□□□ -2.32
snR9	snR9	GAL83	Q04739	417 aa		0.57	□□□□□ -2.32
snR9	snR9	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.57	□□□□□ -2.32
snR9	snR9	CCS1	P40202	249 aa	Known RBP	0.56	□□□□□ -2.32
snR9	snR9	YJR015W	P47090	510 aa		0.56	□□□□□ -2.32
snR9	snR9	AIM34	Q03673	198 aa		0.56	□□□□□ -2.32
snR9	snR9	NOC4	Q06512	552 aa	Predicted RBP	0.56	□□□□□ -2.32
snR9	snR9	YLR422W	Q06409	1932 aa		0.56	□□□□□ -2.32
snR9	snR9	TAH1	P25638	111 aa	Predicted RBP	0.55	□□□□□ -2.32
snR9	snR9	YOR381W-A	Q3E804	55 aa		0.55	□□□□□ -2.32
snR9	snR9	YKR070W	P36151	352 aa	Known RBP	0.54	□□□□□ -2.32
snR9	snR9	HHT1	P61830	136 aa		0.54	□□□□□ -2.32
snR9	snR9	MPD1	Q12404	318 aa	Known RBP	0.54	□□□□□ -2.32
snR9	snR9	TRX3	P25372	127 aa		0.53	□□□□□ -2.32
snR9	snR9	CAF4	P36130	643 aa		0.53	□□□□□ -2.32
snR9	snR9	FYV4	P38783	130 aa	Predicted RBP	0.53	□□□□□ -2.32
snR9	snR9	RIM9	Q04734	239 aa		0.53	□□□□□ -2.32
snR9	snR9	HSP30	P25619	332 aa		0.52	□□□□□ -2.33
snR9	snR9	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
snR9	snR9	SHB17	P36136	271 aa	Known RBP	0.52	□□□□□ -2.33
snR9	snR9	YGL230C	P53074	147 aa		0.52	□□□□□ -2.33
snR9	snR9	CGR1	P53188	120 aa		0.52	□□□□□ -2.33
snR9	snR9	GRX5	Q02784	150 aa		0.52	□□□□□ -2.33
snR9	snR9	RAD9	P14737	1309 aa		0.52	□□□□□ -2.33
snR9	snR9	FMP32	P43557	207 aa		0.51	□□□□□ -2.33
snR9	snR9	TMA23	Q03525	211 aa		0.51	□□□□□ -2.33
snR9	snR9	GRX8	Q05926	109 aa		0.51	□□□□□ -2.33
snR9	snR9	SHH4	Q06236	168 aa		0.51	□□□□□ -2.33
snR9	snR9	KEI1	Q06346	221 aa		0.51	□□□□□ -2.33
snR9	snR9	AHC2	P25649	128 aa		0.5	□□□□□ -2.33
snR9	snR9	YNL200C	P40165	246 aa	Known RBP	0.5	□□□□□ -2.33
snR9	snR9	VPS28	Q02767	242 aa		0.5	□□□□□ -2.33
snR9	snR9	YDC1	Q02896	317 aa		0.5	□□□□□ -2.33
snR9	snR9	GPI17	Q04080	534 aa		0.5	□□□□□ -2.33
snR9	snR9	AVO2	Q04749	426 aa		0.5	□□□□□ -2.33
snR9	snR9	BRX1	Q08235	291 aa	Known RBP	0.5	□□□□□ -2.33
snR9	snR9	YOL013W-A	P0C272	63 aa	Predicted RBP	0.49	□□□□□ -2.33
snR9	snR9	SEC14	P24280	304 aa	Known RBP	0.49	□□□□□ -2.33
snR9	snR9	YKL102C	P34249	101 aa		0.49	□□□□□ -2.33
snR9	snR9	CPR5	P35176	225 aa		0.49	□□□□□ -2.33
snR9	snR9	RFC2	P40348	353 aa		0.49	□□□□□ -2.33
snR9	snR9	YKR005C	Q02203	525 aa		0.49	□□□□□ -2.33
snR9	snR9	CWC21	Q03375	135 aa	Known RBP	0.48	□□□□□ -2.33
snR9	snR9	YPR127W	Q06494	345 aa		0.48	□□□□□ -2.33
snR9	snR9	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
snR9	snR9	PRE1	P22141	198 aa	Known RBP	0.47	□□□□□ -2.33
snR9	snR9	YKR041W	P36134	250 aa		0.47	□□□□□ -2.33
snR9	snR9	SHG1	P38337	142 aa		0.47	□□□□□ -2.33
snR9	snR9	MOB1	P40484	314 aa		0.47	□□□□□ -2.33
snR9	snR9	YOR214C	Q12282	236 aa		0.47	□□□□□ -2.33
snR9	snR9	YCR001W	P25347	104 aa		0.46	□□□□□ -2.34
snR9	snR9	NVJ1	P38881	321 aa		0.46	□□□□□ -2.34
snR9	snR9	PAC10	P48363	199 aa		0.46	□□□□□ -2.34
snR9	snR9	FCY1	Q12178	158 aa		0.46	□□□□□ -2.34
snR9	snR9	KIN28	P06242	306 aa		0.45	□□□□□ -2.34
snR9	snR9	APA2	P22108	325 aa		0.45	□□□□□ -2.34
snR9	snR9	POG1	P40473	351 aa		0.45	□□□□□ -2.34
snR9	snR9	TTI2	P47168	421 aa		0.45	□□□□□ -2.34
snR9	snR9	SOL1	P50278	321 aa		0.45	□□□□□ -2.34
snR9	snR9	SNO1	Q03144	224 aa		0.45	□□□□□ -2.34
snR9	snR9	HPT1	Q04178	221 aa	Known RBP	0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms