RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W SBH1P52870 82 aa2.17□□□□□ -2.06
VPS28YPL065W DAD4P69851 72 aa2.17□□□□□ -2.06
VPS28YPL065W SEC14P24280 304 aaKnown RBP2.16□□□□□ -2.06
VPS28YPL065W MAK5P38112 773 aaPredicted RBP2.16□□□□□ -2.06
VPS28YPL065W FLX1P40464 311 aa2.16□□□□□ -2.06
VPS28YPL065W SOL1P50278 321 aa2.16□□□□□ -2.06
VPS28YPL065W UBC7Q02159 165 aa2.16□□□□□ -2.06
VPS28YPL065W PEX11Q12462 236 aa2.16□□□□□ -2.06
VPS28YPL065W CPR5P35176 225 aa2.15□□□□□ -2.07
VPS28YPL065W RFC2P40348 353 aa2.15□□□□□ -2.07
VPS28YPL065W THG1P53215 237 aaKnown RBP2.15□□□□□ -2.07
VPS28YPL065W HPT1Q04178 221 aaKnown RBP2.15□□□□□ -2.07
VPS28YPL065W ATP20Q12233 115 aa2.15□□□□□ -2.07
VPS28YPL065W NSA2P40078 261 aaKnown RBP2.14□□□□□ -2.07
VPS28YPL065W RIO2P40160 425 aaKnown RBP2.14□□□□□ -2.07
VPS28YPL065W YAE1P47118 141 aaPredicted RBP2.14□□□□□ -2.07
VPS28YPL065W GIM5Q04493 163 aa2.14□□□□□ -2.07
VPS28YPL065W GAL83Q04739 417 aa2.14□□□□□ -2.07
VPS28YPL065W RAD51P25454 400 aa2.13□□□□□ -2.07
VPS28YPL065W STP22P25604 385 aa2.13□□□□□ -2.07
VPS28YPL065W HYR1P40581 163 aaKnown RBP2.13□□□□□ -2.07
VPS28YPL065W YNL140CP53910 189 aa2.13□□□□□ -2.07
VPS28YPL065W TLG1Q03322 224 aa2.13□□□□□ -2.07
VPS28YPL065W RCE1Q03530 315 aa2.13□□□□□ -2.07
VPS28YPL065W GSP2P32836 220 aaKnown RBP2.12□□□□□ -2.07
VPS28YPL065W PST2Q12335 198 aaKnown RBP2.12□□□□□ -2.07
VPS28YPL065W SFK1P35735 353 aa2.11□□□□□ -2.07
VPS28YPL065W YFH7P43591 353 aa2.11□□□□□ -2.07
VPS28YPL065W DAS2Q12084 232 aa2.11□□□□□ -2.07
VPS28YPL065W RRT1P38192 103 aa2.1□□□□□ -2.07
VPS28YPL065W FYV4P38783 130 aaPredicted RBP2.1□□□□□ -2.07
VPS28YPL065W CWC27Q02770 301 aa2.1□□□□□ -2.07
VPS28YPL065W YLR050CQ12155 161 aaKnown RBP2.1□□□□□ -2.07
VPS28YPL065W YLR422WQ06409 1932 aa2.09□□□□□ -2.07
VPS28YPL065W HPA3P39979 161 aa2.09□□□□□ -2.07
VPS28YPL065W EDC3P39998 551 aaKnown RBP2.09□□□□□ -2.07
VPS28YPL065W YNL200CP40165 246 aaKnown RBP2.09□□□□□ -2.07
VPS28YPL065W TTI2P47168 421 aa2.09□□□□□ -2.07
VPS28YPL065W YMR252CQ04814 134 aa2.09□□□□□ -2.07
VPS28YPL065W AQY2P0CD90 149 aa2.08□□□□□ -2.08
VPS28YPL065W YCR023CP25351 611 aa2.08□□□□□ -2.08
VPS28YPL065W RPB7P34087 171 aa2.08□□□□□ -2.08
VPS28YPL065W CSH1P38287 376 aa2.08□□□□□ -2.08
VPS28YPL065W YHL042WP38729 150 aa2.08□□□□□ -2.08
VPS28YPL065W YEL008WP40001 126 aa2.08□□□□□ -2.08
VPS28YPL065W YER121WP40076 114 aa2.08□□□□□ -2.08
VPS28YPL065W PIR1Q03178 341 aa2.08□□□□□ -2.08
VPS28YPL065W ALB1P47019 175 aaPredicted RBP2.07□□□□□ -2.08
VPS28YPL065W ACC1Q00955 2233 aaKnown RBP2.06□□□□□ -2.08
VPS28YPL065W RME1P32338 300 aaKnown RBP2.06□□□□□ -2.08
VPS28YPL065W YFL065CP43539 102 aa2.06□□□□□ -2.08
VPS28YPL065W VPS28Q02767 242 aa2.06□□□□□ -2.08
VPS28YPL065W YOR214CQ12282 236 aa2.06□□□□□ -2.08
VPS28YPL065W CMC2Q3E7A4 109 aa2.06□□□□□ -2.08
VPS28YPL065W YCL042WP25572 119 aa2.05□□□□□ -2.08
VPS28YPL065W HSP30P25619 332 aa2.05□□□□□ -2.08
VPS28YPL065W VPS51P36116 164 aa2.05□□□□□ -2.08
VPS28YPL065W HSK3P69852 69 aa2.05□□□□□ -2.08
VPS28YPL065W PLP1Q04004 230 aa2.05□□□□□ -2.08
VPS28YPL065W UPS3Q04006 179 aa2.05□□□□□ -2.08
VPS28YPL065W RRP17Q04031 235 aaPredicted RBP2.05□□□□□ -2.08
VPS28YPL065W UPS1Q05776 175 aa2.05□□□□□ -2.08
VPS28YPL065W YPR127WQ06494 345 aa2.05□□□□□ -2.08
VPS28YPL065W YOR015WQ12169 119 aa2.05□□□□□ -2.08
VPS28YPL065W YKR005CQ02203 525 aa2.04□□□□□ -2.08
VPS28YPL065W CMD1P06787 147 aaKnown RBP2.03□□□□□ -2.08
VPS28YPL065W STF2P16965 84 aa2.03□□□□□ -2.08
VPS28YPL065W MPM1P40364 252 aa2.03□□□□□ -2.08
VPS28YPL065W NSE4P43124 402 aa2.03□□□□□ -2.08
VPS28YPL065W TIM13P53299 105 aa2.03□□□□□ -2.08
VPS28YPL065W DML1Q03652 475 aa2.03□□□□□ -2.08
VPS28YPL065W RIM9Q04734 239 aa2.03□□□□□ -2.08
VPS28YPL065W YOR381W-AQ3E804 55 aa2.03□□□□□ -2.08
VPS28YPL065W VAR1P02381 398 aa2.02□□□□□ -2.09
VPS28YPL065W YHR212W-AP0CX91 67 aa2.02□□□□□ -2.09
VPS28YPL065W YGL235WP53071 178 aa2.02□□□□□ -2.09
VPS28YPL065W THI74Q04083 370 aa2.02□□□□□ -2.09
VPS28YPL065W YEL067CP39978 195 aa2.01□□□□□ -2.09
VPS28YPL065W XPT1P47165 209 aa2.01□□□□□ -2.09
VPS28YPL065W YHP1Q04116 353 aa2.01□□□□□ -2.09
VPS28YPL065W ATG41Q12048 136 aa2.01□□□□□ -2.09
VPS28YPL065W RAD6P06104 172 aa1.99□□□□□ -2.09
VPS28YPL065W SEN2P16658 377 aa1.99□□□□□ -2.09
VPS28YPL065W SOK1P40317 901 aa1.99□□□□□ -2.09
VPS28YPL065W ELP6Q04868 273 aa1.99□□□□□ -2.09
VPS28YPL065W COA3Q3E7B2 85 aa1.99□□□□□ -2.09
VPS28YPL065W MET31Q03081 177 aa1.98□□□□□ -2.09
VPS28YPL065W NUF2P33895 451 aa1.97□□□□□ -2.09
VPS28YPL065W YEL028WP39989 153 aa1.97□□□□□ -2.09
VPS28YPL065W GLR1P41921 483 aaKnown RBP1.97□□□□□ -2.09
VPS28YPL065W GRX5Q02784 150 aa1.97□□□□□ -2.09
VPS28YPL065W CCS1P40202 249 aaKnown RBP1.96□□□□□ -2.1
VPS28YPL065W RDI1Q12434 202 aa1.96□□□□□ -2.1
VPS28YPL065W TAR1Q8TGM6 124 aa1.96□□□□□ -2.1
VPS28YPL065W TRM3Q07527 1436 aa1.96□□□□□ -2.1
VPS28YPL065W FES1P38260 290 aa1.95□□□□□ -2.1
VPS28YPL065W YEL073CP39974 107 aa1.95□□□□□ -2.1
VPS28YPL065W YGL101WP53144 215 aa1.95□□□□□ -2.1
VPS28YPL065W TMA20P89886 181 aaPredicted RBP1.95□□□□□ -2.1
VPS28YPL065W SYM1Q06563 197 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 61 ms