RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC11, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC11	YOR339C	MRPS17	Q03246	237 aa	Predicted RBP	4.67	□□□□□ -1.66
UBC11	YOR339C	YHP1	Q04116	353 aa		4.67	□□□□□ -1.66
UBC11	YOR339C	ATP14	Q12349	124 aa		4.67	□□□□□ -1.66
UBC11	YOR339C	YPS1	P32329	569 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	YCR041W	P37265	110 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	QDR3	P38227	689 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	PEX7	P39108	375 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	SIT1	P39980	628 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	YJR015W	P47090	510 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	UBC12	P52491	188 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	YNR066C	P53752	436 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	MOT3	P54785	490 aa	Known RBP	4.66	□□□□□ -1.66
UBC11	YOR339C	YML122C	Q03207	126 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	ADD37	Q03233	198 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	YLR179C	Q06252	201 aa	Known RBP	4.66	□□□□□ -1.66
UBC11	YOR339C	ARR3	Q06598	404 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	POS5	Q06892	414 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	PBP4	Q07362	185 aa	Known RBP	4.66	□□□□□ -1.66
UBC11	YOR339C	IRC23	Q08416	157 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	MSA1	Q08471	629 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	RAD28	Q12021	506 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	RKI1	Q12189	258 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	POM34	Q12445	299 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	PAA1	Q12447	191 aa	Known RBP	4.66	□□□□□ -1.66
UBC11	YOR339C	DYN1	P36022	4092 aa		4.66	□□□□□ -1.66
UBC11	YOR339C	ILV5	P06168	395 aa	Known RBP	4.65	□□□□□ -1.67
UBC11	YOR339C	ZRC1	P20107	442 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	SPO13	P23624	291 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	CDC50	P25656	391 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	INO2	P26798	304 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	AHT1	P29589	182 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	DAL3	P32459	195 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	PRS4	P38063	326 aa	Predicted RBP	4.65	□□□□□ -1.67
UBC11	YOR339C	FLO5	P38894	1075 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	YAR068W	P39564	161 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	YCL001W-A	P87012	153 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	SPG4	Q04438	115 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	CTR3	Q06686	241 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	YOR015W	Q12169	119 aa		4.65	□□□□□ -1.67
UBC11	YOR339C	YMR316C-A	I2HB70	103 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	PIS1	P06197	220 aa	Known RBP	4.64	□□□□□ -1.67
UBC11	YOR339C	YBL059W	P34224	193 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	YBL071C	P38185	102 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	YBR292C	P38357	123 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	SNN1	P48232	102 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	YAP1802	P53309	568 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	FMP41	P53889	259 aa	Known RBP	4.64	□□□□□ -1.67
UBC11	YOR339C	ODC1	Q03028	310 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	YMR007W	Q03675	126 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	SHH3	Q04487	196 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	RXT3	Q07458	294 aa		4.64	□□□□□ -1.67
UBC11	YOR339C	YCR022C	P25620	114 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	FPR2	P32472	135 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	CSH1	P38287	376 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	BDH1	P39714	382 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	SPC25	P40014	221 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	CAF16	P43569	289 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	TAX4	P47030	604 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	VPS55	P47111	140 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	GNP1	P48813	663 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	MIC27	P50945	234 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	YGR018C	P53211	109 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	LST7	P53237	242 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	BOR1	P53838	576 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	TMA23	Q03525	211 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	AVO2	Q04749	426 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	YOR352W	Q08816	343 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	COX19	Q3E731	98 aa		4.63	□□□□□ -1.67
UBC11	YOR339C	QCR9	P22289	66 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	MLF3	P32047	452 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	YKL075C	P36083	450 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	SHB17	P36136	271 aa	Known RBP	4.62	□□□□□ -1.67
UBC11	YOR339C	AVT5	P38176	459 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	CDS1	P38221	457 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	DER1	P38307	211 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	DOG2	P38773	246 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	DOG1	P38774	246 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	PTC7	P38797	343 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	SWT21	P53873	357 aa	Predicted RBP	4.62	□□□□□ -1.67
UBC11	YOR339C	ERV25	P54837	211 aa	Known RBP	4.62	□□□□□ -1.67
UBC11	YOR339C	HOR7	Q05827	59 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	ORM2	Q06144	216 aa		4.62	□□□□□ -1.67
UBC11	YOR339C	PET494	P07390	489 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC11	YOR339C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
UBC11	YOR339C	MSK1	P32048	576 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	YNK1	P36010	153 aa	Known RBP	4.61	□□□□□ -1.67
UBC11	YOR339C	RPL14A	P36105	138 aa	Known RBP	4.61	□□□□□ -1.67
UBC11	YOR339C	RRT1	P38192	103 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	SHG1	P38337	142 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	RPL14B	P38754	138 aa	Known RBP	4.61	□□□□□ -1.67
UBC11	YOR339C	FIP1	P45976	327 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	MCM22	P47167	239 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	YDL186W	P48568	277 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	RIB4	P50861	169 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC11	YOR339C	YGR219W	P53307	113 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	CPD1	P53314	239 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	YMR181C	Q03231	154 aa		4.61	□□□□□ -1.67
UBC11	YOR339C	CDC7	P06243	507 aa		4.6	□□□□□ -1.67
UBC11	YOR339C	SNU13	P39990	126 aa	Known RBP	4.6	□□□□□ -1.67
UBC11	YOR339C	SMD3	P43321	101 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms