RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C YAR068WP39564 161 aa2.48□□□□□ -2.01
HRD1YOL013C RFC2P40348 353 aa2.48□□□□□ -2.01
HRD1YOL013C SKI6P46948 246 aaPredicted RBP2.48□□□□□ -2.01
HRD1YOL013C MNN5P46982 586 aa2.48□□□□□ -2.01
HRD1YOL013C UBC7Q02159 165 aa2.48□□□□□ -2.01
HRD1YOL013C MRPS16Q02608 121 aa2.48□□□□□ -2.01
HRD1YOL013C YOL014WQ08110 124 aa2.48□□□□□ -2.01
HRD1YOL013C DGK1Q12382 290 aa2.48□□□□□ -2.01
HRD1YOL013C SGA1P08019 549 aa2.47□□□□□ -2.01
HRD1YOL013C RPL30P14120 105 aaKnown RBP2.47□□□□□ -2.01
HRD1YOL013C ATP15P21306 62 aa2.47□□□□□ -2.01
HRD1YOL013C TRS20P38334 175 aa2.47□□□□□ -2.01
HRD1YOL013C GLC8P41818 229 aa2.47□□□□□ -2.01
HRD1YOL013C CAB4P53332 305 aa2.47□□□□□ -2.01
HRD1YOL013C APJ1P53940 528 aa2.47□□□□□ -2.01
HRD1YOL013C ATG39Q06159 398 aa2.47□□□□□ -2.01
HRD1YOL013C YDL180WQ12301 547 aa2.47□□□□□ -2.01
HRD1YOL013C YPR014CQ6B0W2 109 aa2.47□□□□□ -2.01
HRD1YOL013C DUR1,2P32528 1835 aaKnown RBP2.47□□□□□ -2.01
HRD1YOL013C YEL009C-AA0A023PZF2 135 aa2.47□□□□□ -2.01
HRD1YOL013C CDC8P00572 216 aa2.47□□□□□ -2.01
HRD1YOL013C PBI2P0CT04 75 aaKnown RBP2.47□□□□□ -2.01
HRD1YOL013C OCH1P31755 480 aa2.47□□□□□ -2.01
HRD1YOL013C FIS1P40515 155 aa2.47□□□□□ -2.01
HRD1YOL013C YGL088WP53151 121 aa2.47□□□□□ -2.01
HRD1YOL013C FMN1Q03778 218 aa2.47□□□□□ -2.01
HRD1YOL013C HRD1Q08109 551 aa2.47□□□□□ -2.01
HRD1YOL013C WIP1Q2V2P8 89 aa2.47□□□□□ -2.01
HRD1YOL013C ISD11Q6Q560 94 aa2.47□□□□□ -2.01
HRD1YOL013C PMD1P32634 1753 aa2.46□□□□□ -2.02
HRD1YOL013C ADH1P00330 348 aaKnown RBP2.46□□□□□ -2.02
HRD1YOL013C REP2P03872 296 aa2.46□□□□□ -2.02
HRD1YOL013C RAD10P06838 210 aa2.46□□□□□ -2.02
HRD1YOL013C BET1P22804 142 aa2.46□□□□□ -2.02
HRD1YOL013C SUA7P29055 345 aaPredicted RBP2.46□□□□□ -2.02
HRD1YOL013C ECM34P38728 170 aa2.46□□□□□ -2.02
HRD1YOL013C PHB1P40961 287 aa2.46□□□□□ -2.02
HRD1YOL013C PFS2P42841 465 aaKnown RBP2.46□□□□□ -2.02
HRD1YOL013C TTI2P47168 421 aa2.46□□□□□ -2.02
HRD1YOL013C HHT1P61830 136 aa2.46□□□□□ -2.02
HRD1YOL013C FCF1Q05498 189 aaPredicted RBP2.46□□□□□ -2.02
HRD1YOL013C PSF1Q12488 208 aa2.46□□□□□ -2.02
HRD1YOL013C YML100W-AQ8TGT0 57 aa2.46□□□□□ -2.02
HRD1YOL013C STP22P25604 385 aa2.45□□□□□ -2.02
HRD1YOL013C YEL045CP32616 141 aa2.45□□□□□ -2.02
HRD1YOL013C RPS1AP33442 255 aaKnown RBP2.45□□□□□ -2.02
HRD1YOL013C OPY1P38271 328 aa2.45□□□□□ -2.02
HRD1YOL013C YER137CP40083 148 aaKnown RBP2.45□□□□□ -2.02
HRD1YOL013C PRE5P40302 234 aaKnown RBP2.45□□□□□ -2.02
HRD1YOL013C SER2P42941 309 aa2.45□□□□□ -2.02
HRD1YOL013C YFL019CP43576 117 aa2.45□□□□□ -2.02
HRD1YOL013C FIP1P45976 327 aa2.45□□□□□ -2.02
HRD1YOL013C SNX4P47057 423 aa2.45□□□□□ -2.02
HRD1YOL013C TDA4P47153 279 aa2.45□□□□□ -2.02
HRD1YOL013C YGR219WP53307 113 aa2.45□□□□□ -2.02
HRD1YOL013C SMD1Q02260 146 aaPredicted RBP2.45□□□□□ -2.02
HRD1YOL013C NAT3Q06504 195 aa2.45□□□□□ -2.02
HRD1YOL013C FYV12Q08559 129 aa2.45□□□□□ -2.02
HRD1YOL013C Q0144Q9ZZW2 109 aa2.45□□□□□ -2.02
HRD1YOL013C TKL2P33315 681 aa2.44□□□□□ -2.02
HRD1YOL013C SKG1P36169 355 aa2.44□□□□□ -2.02
HRD1YOL013C MED6P38782 295 aa2.44□□□□□ -2.02
HRD1YOL013C YHR125WP38831 101 aa2.44□□□□□ -2.02
HRD1YOL013C CTR2P38865 189 aa2.44□□□□□ -2.02
HRD1YOL013C TIF34P40217 347 aaKnown RBP2.44□□□□□ -2.02
HRD1YOL013C ALG9P53868 555 aaKnown RBP2.44□□□□□ -2.02
HRD1YOL013C ATO3Q12359 275 aa2.44□□□□□ -2.02
HRD1YOL013C URA5P13298 226 aaKnown RBP2.44□□□□□ -2.02
HRD1YOL013C SPT14P32363 452 aa2.44□□□□□ -2.02
HRD1YOL013C COS8P38723 381 aa2.44□□□□□ -2.02
HRD1YOL013C AVT2P39981 480 aa2.44□□□□□ -2.02
HRD1YOL013C VTC1P40046 129 aaRIP-Chip data2.44□□□□□ -2.02 RIP-Chip
HRD1YOL013C YPL073CP40323 161 aa2.44□□□□□ -2.02
HRD1YOL013C DLS1P40366 167 aa2.44□□□□□ -2.02
HRD1YOL013C GLR1P41921 483 aaKnown RBP2.44□□□□□ -2.02
HRD1YOL013C YFR054CP43622 192 aa2.44□□□□□ -2.02
HRD1YOL013C BUD13P46947 266 aaPredicted RBP2.44□□□□□ -2.02
HRD1YOL013C SPG3Q04398 127 aaPredicted RBP2.44□□□□□ -2.02
HRD1YOL013C YDR278CQ05612 105 aa2.44□□□□□ -2.02
HRD1YOL013C NEJ1Q06148 342 aa2.44□□□□□ -2.02
HRD1YOL013C YPD1Q07688 167 aa2.44□□□□□ -2.02
HRD1YOL013C AKR2Q12013 749 aa2.44□□□□□ -2.02
HRD1YOL013C TIM9O74700 87 aa2.43□□□□□ -2.02
HRD1YOL013C RPL9AP05738 191 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C YHR032W-AP0C5N6 59 aa2.43□□□□□ -2.02
HRD1YOL013C SCL1P21243 252 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C RSA4P25382 515 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C NSG1P38837 291 aa2.43□□□□□ -2.02
HRD1YOL013C FCY21P40039 528 aa2.43□□□□□ -2.02
HRD1YOL013C SMD3P43321 101 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C GON7P46984 123 aa2.43□□□□□ -2.02
HRD1YOL013C RPL9BP51401 191 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C COF1Q03048 143 aaKnown RBP2.43□□□□□ -2.02
HRD1YOL013C CCA1P21269 546 aa2.42□□□□□ -2.02
HRD1YOL013C FYV4P38783 130 aaPredicted RBP2.42□□□□□ -2.02
HRD1YOL013C YNL200CP40165 246 aaKnown RBP2.42□□□□□ -2.02
HRD1YOL013C OST2P46964 130 aa2.42□□□□□ -2.02
HRD1YOL013C YDR274CP87283 123 aa2.42□□□□□ -2.02
HRD1YOL013C FRQ1Q06389 190 aa2.42□□□□□ -2.02
HRD1YOL013C RSF2P46974 1380 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms