RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	YPR013C	Q12145	317 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	YLR050C	Q12155	161 aa	Known RBP	0.76	□□□□□ -2.29
SWS2	YNL081C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.76	□□□□□ -2.29
SWS2	YNL081C	YML100W-A	Q8TGT0	57 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	AHC2	P25649	128 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	AME1	P38313	324 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	YHL018W	P38744	120 aa	Predicted RBP	0.75	□□□□□ -2.29
SWS2	YNL081C	FMP32	P43557	207 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	TMA22	P47089	198 aa	Predicted RBP	0.75	□□□□□ -2.29
SWS2	YNL081C	TDA4	P47153	279 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	SOL1	P50278	321 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	DAD4	P69851	72 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	GPI17	Q04080	534 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	HPT1	Q04178	221 aa	Known RBP	0.75	□□□□□ -2.29
SWS2	YNL081C	SHH4	Q06236	168 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	NAT3	Q06504	195 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	YLR031W	Q07978	186 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	NSL1	Q12143	216 aa		0.75	□□□□□ -2.29
SWS2	YNL081C	MPD1	Q12404	318 aa	Known RBP	0.75	□□□□□ -2.29
SWS2	YNL081C	FAS1	P07149	2051 aa	Known RBP	0.75	□□□□□ -2.29
SWS2	YNL081C	COX8	P04039	78 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	QCR2	P07257	368 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	RPS24A	P0CX31	135 aa	Known RBP	0.74	□□□□□ -2.29
SWS2	YNL081C	RPS24B	P0CX32	135 aa	Known RBP	0.74	□□□□□ -2.29
SWS2	YNL081C	PHO85	P17157	305 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	YCL042W	P25572	119 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	STP22	P25604	385 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	YKL102C	P34249	101 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	PAM17	P36147	197 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	MTW1	P39731	289 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	YNL200C	P40165	246 aa	Known RBP	0.74	□□□□□ -2.29
SWS2	YNL081C	YFL019C	P43576	117 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	AIM34	Q03673	198 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	YMR252C	Q04814	134 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	RNH202	Q05635	350 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	FIT2	Q08906	153 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	DGK1	Q12382	290 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	RDI1	Q12434	202 aa		0.74	□□□□□ -2.29
SWS2	YNL081C	TIR1	P10863	254 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	SEC14	P24280	304 aa	Known RBP	0.73	□□□□□ -2.29
SWS2	YNL081C	YCR023C	P25351	611 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	UBC8	P28263	218 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	CPR5	P35176	225 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	FIG1	P38224	298 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	DER1	P38307	211 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	SLM6	P38343	150 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	FYV4	P38783	130 aa	Predicted RBP	0.73	□□□□□ -2.29
SWS2	YNL081C	NSG1	P38837	291 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	HPA3	P39979	161 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	RFC2	P40348	353 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	CUP9	P41817	306 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	GPI14	P47088	403 aa	Known RBP	0.73	□□□□□ -2.29
SWS2	YNL081C	TTI2	P47168	421 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	UPS3	Q04006	179 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	YMR253C	Q04835	414 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	YLR053C	Q12026	108 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	DAS2	Q12084	232 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	PEX11	Q12462	236 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	YLR412C-A	Q3E742	68 aa		0.73	□□□□□ -2.29
SWS2	YNL081C	CMD1	P06787	147 aa	Known RBP	0.72	□□□□□ -2.29
SWS2	YNL081C	UBI4	P0CG63	381 aa	Known RBP	0.72	□□□□□ -2.29
SWS2	YNL081C	ACP1	P32463	125 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	GSP2	P32836	220 aa	Known RBP	0.72	□□□□□ -2.29
SWS2	YNL081C	RPB7	P34087	171 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	SFK1	P35735	353 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	CSH1	P38287	376 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YEL008W	P40001	126 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YGL235W	P53071	178 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YNL033W	P53964	284 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YDC1	Q02896	317 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	VPS71	Q03433	280 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	LCL2	Q08045	131 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YPR202W	Q08993	238 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	ATP20	Q12233	115 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	YLR046C	Q12253	270 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	EFG1	Q3E705	233 aa	Known RBP	0.72	□□□□□ -2.29
SWS2	YNL081C	YPR014C	Q6B0W2	109 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	PET20	Q99373	253 aa		0.72	□□□□□ -2.29
SWS2	YNL081C	IDP1	P21954	428 aa	Known RBP	0.71	□□□□□ -2.3
SWS2	YNL081C	SPC25	P40014	221 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	MOG1	P47123	218 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	YGL101W	P53144	215 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	THG1	P53215	237 aa	Known RBP	0.71	□□□□□ -2.3
SWS2	YNL081C	ORM1	P53224	222 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	NQM1	P53228	333 aa	Predicted RBP	0.71	□□□□□ -2.3
SWS2	YNL081C	PLP1	Q04004	230 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	THI74	Q04083	370 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	YPR127W	Q06494	345 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	FYV12	Q08559	129 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	YOR342C	Q12182	319 aa		0.71	□□□□□ -2.3
SWS2	YNL081C	PST2	Q12335	198 aa	Known RBP	0.71	□□□□□ -2.3
SWS2	YNL081C	RPS28B	P0C0X0	67 aa	Known RBP	0.7	□□□□□ -2.3
SWS2	YNL081C	NUF2	P33895	451 aa		0.7	□□□□□ -2.3
SWS2	YNL081C	SRP102	P36057	244 aa	Predicted RBP	0.7	□□□□□ -2.3
SWS2	YNL081C	RRT1	P38192	103 aa		0.7	□□□□□ -2.3
SWS2	YNL081C	NSA2	P40078	261 aa	Known RBP	0.7	□□□□□ -2.3
SWS2	YNL081C	LSM1	P47017	172 aa	Known RBP	0.7	□□□□□ -2.3
SWS2	YNL081C	ALB1	P47019	175 aa	Predicted RBP	0.7	□□□□□ -2.3
SWS2	YNL081C	XPT1	P47165	209 aa		0.7	□□□□□ -2.3
SWS2	YNL081C	SBH2	P52871	88 aa		0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms