RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YKR045CP36138 183 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A PAM17P36147 197 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A FIG1P38224 298 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A CUP9P41817 306 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A YFH7P43591 353 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A YNL033WP53964 284 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A DIG2Q03373 323 aaKnown RBP2.65□□□□□ -1.99
YNL054W-AYNL054W-A THI74Q04083 370 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A GAL83Q04739 417 aa2.65□□□□□ -1.99
YNL054W-AYNL054W-A NSP1P14907 823 aaKnown RBP2.64□□□□□ -1.99
YNL054W-AYNL054W-A YPR127WQ06494 345 aa2.64□□□□□ -1.99
YNL054W-AYNL054W-A MET5P47169 1442 aa2.63□□□□□ -1.99
YNL054W-AYNL054W-A TVP23P38962 199 aa2.63□□□□□ -1.99
YNL054W-AYNL054W-A YGL101WP53144 215 aa2.63□□□□□ -1.99
YNL054W-AYNL054W-A TMA19P35691 167 aaKnown RBP2.62□□□□□ -1.99
YNL054W-AYNL054W-A SLM6P38343 150 aa2.62□□□□□ -1.99
YNL054W-AYNL054W-A TMA20P89886 181 aaPredicted RBP2.62□□□□□ -1.99
YNL054W-AYNL054W-A EFG1Q3E705 233 aaKnown RBP2.62□□□□□ -1.99
YNL054W-AYNL054W-A RPS28BP0C0X0 67 aaKnown RBP2.61□□□□□ -1.99
YNL054W-AYNL054W-A NUF2P33895 451 aa2.61□□□□□ -1.99
YNL054W-AYNL054W-A RRT1P38192 103 aa2.61□□□□□ -1.99
YNL054W-AYNL054W-A DAD4P69851 72 aa2.61□□□□□ -1.99
YNL054W-AYNL054W-A YLR162WQ06235 118 aa2.61□□□□□ -1.99
YNL054W-AYNL054W-A YOR214CQ12282 236 aa2.61□□□□□ -1.99
YNL054W-AYNL054W-A RPS28AQ3E7X9 67 aaPredicted RBP2.61□□□□□ -1.99
YNL054W-AYNL054W-A UBI4P0CG63 381 aaKnown RBP2.6□□□□□ -1.99
YNL054W-AYNL054W-A YER135CP40082 130 aa2.6□□□□□ -1.99
YNL054W-AYNL054W-A YPL073CP40323 161 aa2.6□□□□□ -1.99
YNL054W-AYNL054W-A SBH1P52870 82 aa2.6□□□□□ -1.99
YNL054W-AYNL054W-A ORM1P53224 222 aa2.6□□□□□ -1.99
YNL054W-AYNL054W-A MAK3Q03503 176 aa2.6□□□□□ -1.99
YNL054W-AYNL054W-A FLO9P39712 1322 aa2.59□□□□□ -1.99
YNL054W-AYNL054W-A STP22P25604 385 aa2.59□□□□□ -2
YNL054W-AYNL054W-A YBR219CP38317 127 aa2.59□□□□□ -2
YNL054W-AYNL054W-A YBR220CP38318 560 aa2.59□□□□□ -2
YNL054W-AYNL054W-A YHL018WP38744 120 aaPredicted RBP2.59□□□□□ -2
YNL054W-AYNL054W-A PRP11Q07350 266 aaPredicted RBP2.59□□□□□ -2
YNL054W-AYNL054W-A YPR013CQ12145 317 aa2.59□□□□□ -2
YNL054W-AYNL054W-A YLR046CQ12253 270 aa2.59□□□□□ -2
YNL054W-AYNL054W-A PST2Q12335 198 aaKnown RBP2.59□□□□□ -2
YNL054W-AYNL054W-A PET20Q99373 253 aa2.59□□□□□ -2
YNL054W-AYNL054W-A THG1P53215 237 aaKnown RBP2.58□□□□□ -2
YNL054W-AYNL054W-A YPR202WQ08993 238 aa2.58□□□□□ -2
YNL054W-AYNL054W-A YOR381W-AQ3E804 55 aa2.58□□□□□ -2
YNL054W-AYNL054W-A SBH2P52871 88 aa2.57□□□□□ -2
YNL054W-AYNL054W-A LSM3P57743 89 aaKnown RBP2.57□□□□□ -2
YNL054W-AYNL054W-A YPR174CQ06616 221 aaPredicted RBP2.57□□□□□ -2
YNL054W-AYNL054W-A HSP30P25619 332 aa2.56□□□□□ -2
YNL054W-AYNL054W-A UBC8P28263 218 aa2.56□□□□□ -2
YNL054W-AYNL054W-A GLR1P41921 483 aaKnown RBP2.56□□□□□ -2
YNL054W-AYNL054W-A TIM13P53299 105 aa2.56□□□□□ -2
YNL054W-AYNL054W-A YKR005CQ02203 525 aa2.56□□□□□ -2
YNL054W-AYNL054W-A CSI2Q08054 341 aa2.56□□□□□ -2
YNL054W-AYNL054W-A MDM35O60200 86 aa2.55□□□□□ -2
YNL054W-AYNL054W-A COX8P04039 78 aa2.55□□□□□ -2
YNL054W-AYNL054W-A RPL2AP0CX45 254 aaKnown RBP2.55□□□□□ -2
YNL054W-AYNL054W-A RPL2BP0CX46 254 aaKnown RBP2.55□□□□□ -2
YNL054W-AYNL054W-A UPS2P35200 230 aa2.55□□□□□ -2
YNL054W-AYNL054W-A NQM1P53228 333 aaPredicted RBP2.55□□□□□ -2
YNL054W-AYNL054W-A VPS28Q02767 242 aa2.55□□□□□ -2
YNL054W-AYNL054W-A FIT2Q08906 153 aa2.55□□□□□ -2
YNL054W-AYNL054W-A YOR015WQ12169 119 aa2.55□□□□□ -2
YNL054W-AYNL054W-A FAS1P07149 2051 aaKnown RBP2.54□□□□□ -2
YNL054W-AYNL054W-A BUB2P26448 306 aaPredicted RBP2.54□□□□□ -2
YNL054W-AYNL054W-A APQ12P40532 138 aa2.54□□□□□ -2
YNL054W-AYNL054W-A MOG1P47123 218 aa2.54□□□□□ -2
YNL054W-AYNL054W-A YDC1Q02896 317 aa2.54□□□□□ -2
YNL054W-AYNL054W-A YDR476CQ03362 224 aa2.54□□□□□ -2
YNL054W-AYNL054W-A SFK1P35735 353 aa2.53□□□□□ -2
YNL054W-AYNL054W-A DLS1P40366 167 aa2.53□□□□□ -2
YNL054W-AYNL054W-A RAD6P06104 172 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A ATP5P09457 212 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A YGL010WP25338 174 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A RPL13BP40212 199 aaKnown RBP2.52□□□□□ -2.01
YNL054W-AYNL054W-A NSE4P43124 402 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A DML1Q03652 475 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A RIM9Q04734 239 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A SYM1Q06563 197 aa2.52□□□□□ -2.01
YNL054W-AYNL054W-A RPL13AQ12690 199 aaPredicted RBP2.52□□□□□ -2.01
YNL054W-AYNL054W-A RPL30P14120 105 aaKnown RBP2.51□□□□□ -2.01
YNL054W-AYNL054W-A GSP2P32836 220 aaKnown RBP2.51□□□□□ -2.01
YNL054W-AYNL054W-A YEL073CP39974 107 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A YEL028WP39989 153 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A PAC10P48363 199 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A UPS1Q05776 175 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A YHR007C-AQ07074 71 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A MSB2P32334 1306 aa2.51□□□□□ -2.01
YNL054W-AYNL054W-A PBI2P0CT04 75 aaKnown RBP2.5□□□□□ -2.01
YNL054W-AYNL054W-A PEX34P25584 144 aa2.5□□□□□ -2.01
YNL054W-AYNL054W-A HPA3P39979 161 aa2.5□□□□□ -2.01
YNL054W-AYNL054W-A FLX1P40464 311 aa2.5□□□□□ -2.01
YNL054W-AYNL054W-A FIP1P45976 327 aa2.5□□□□□ -2.01
YNL054W-AYNL054W-A BAT2P47176 376 aaKnown RBP2.5□□□□□ -2.01
YNL054W-AYNL054W-A YHP1Q04116 353 aa2.5□□□□□ -2.01
YNL054W-AYNL054W-A GPA2P10823 449 aa2.49□□□□□ -2.01
YNL054W-AYNL054W-A YRA2P36036 203 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
YNL054W-AYNL054W-A MPM1P40364 252 aa2.49□□□□□ -2.01
YNL054W-AYNL054W-A LSM1P47017 172 aaKnown RBP2.49□□□□□ -2.01
YNL054W-AYNL054W-A PIR1Q03178 341 aa2.49□□□□□ -2.01
YNL054W-AYNL054W-A YDR102CQ03864 110 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms