RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C GEP5Q12393 293 aa9.47□□□□□ -0.89
LCB1YMR296C WSS1P38838 269 aa9.46□□□□□ -0.89
LCB1YMR296C COX15P40086 486 aa9.46□□□□□ -0.89
LCB1YMR296C YNL046WP53956 172 aa9.46□□□□□ -0.89
LCB1YMR296C ARR3Q06598 404 aa9.46□□□□□ -0.89
LCB1YMR296C RPS25BP0C0T4 108 aaKnown RBP9.45□□□□□ -0.9
LCB1YMR296C SEC59P20048 519 aa9.45□□□□□ -0.9
LCB1YMR296C LSB5P25369 354 aa9.45□□□□□ -0.9
LCB1YMR296C MRPS9P38120 278 aa9.45□□□□□ -0.9
LCB1YMR296C DFG10P40526 253 aa9.45□□□□□ -0.9
LCB1YMR296C NCA3P46955 337 aa9.45□□□□□ -0.9
LCB1YMR296C AVO2Q04749 426 aa9.45□□□□□ -0.9
LCB1YMR296C RPS25AQ3E792 108 aaPredicted RBP9.45□□□□□ -0.9
LCB1YMR296C URA2P07259 2214 aaKnown RBP9.45□□□□□ -0.9
LCB1YMR296C DAL3P32459 195 aa9.45□□□□□ -0.9
LCB1YMR296C YHR138CP38841 114 aaPredicted RBP9.45□□□□□ -0.9
LCB1YMR296C GET2P40056 285 aa9.45□□□□□ -0.9
LCB1YMR296C YIR020CP40575 100 aa9.45□□□□□ -0.9
LCB1YMR296C RIB4P50861 169 aaPredicted RBP9.45□□□□□ -0.9
LCB1YMR296C RPL39P04650 51 aa9.44□□□□□ -0.9
LCB1YMR296C QCR9P22289 66 aa9.44□□□□□ -0.9
LCB1YMR296C YBL059WP34224 193 aa9.44□□□□□ -0.9
LCB1YMR296C YNK1P36010 153 aaKnown RBP9.44□□□□□ -0.9
LCB1YMR296C YHL044WP38727 235 aa9.44□□□□□ -0.9
LCB1YMR296C MGA1P53050 456 aa9.44□□□□□ -0.9
LCB1YMR296C RPL21AQ02753 160 aaKnown RBP9.44□□□□□ -0.9
LCB1YMR296C YMR007WQ03675 126 aa9.44□□□□□ -0.9
LCB1YMR296C YOR029WQ12243 111 aa9.44□□□□□ -0.9
LCB1YMR296C RPL21BQ12672 160 aaKnown RBP9.44□□□□□ -0.9
LCB1YMR296C CMC2Q3E7A4 109 aa9.44□□□□□ -0.9
LCB1YMR296C YMR31P19955 123 aa9.43□□□□□ -0.9
LCB1YMR296C SHB17P36136 271 aaKnown RBP9.43□□□□□ -0.9
LCB1YMR296C QDR3P38227 689 aa9.43□□□□□ -0.9
LCB1YMR296C TRS20P38334 175 aa9.43□□□□□ -0.9
LCB1YMR296C NOP16P40007 231 aaKnown RBP9.43□□□□□ -0.9
LCB1YMR296C CRH1P53301 507 aa9.43□□□□□ -0.9
LCB1YMR296C DYN2Q02647 92 aa9.43□□□□□ -0.9
LCB1YMR296C VPS63O13549 108 aa9.42□□□□□ -0.9
LCB1YMR296C GAR1P28007 205 aaKnown RBP9.42□□□□□ -0.9
LCB1YMR296C IMD2P38697 523 aaKnown RBP9.42□□□□□ -0.9
LCB1YMR296C RTC3P38804 111 aaPredicted RBP9.42□□□□□ -0.9
LCB1YMR296C LPP1Q04396 274 aa9.42□□□□□ -0.9
LCB1YMR296C RAX2Q12465 1220 aa9.42□□□□□ -0.9
LCB1YMR296C CTR2P38865 189 aa9.42□□□□□ -0.9
LCB1YMR296C LOC1P43586 204 aaPredicted RBP9.42□□□□□ -0.9
LCB1YMR296C YGL114WP53134 725 aa9.42□□□□□ -0.9
LCB1YMR296C CDC7P06243 507 aa9.41□□□□□ -0.9
LCB1YMR296C COQ3P27680 312 aa9.41□□□□□ -0.9
LCB1YMR296C ALK2P32789 676 aaPredicted RBP9.41□□□□□ -0.9
LCB1YMR296C YPT31P38555 223 aaKnown RBP9.41□□□□□ -0.9
LCB1YMR296C YFL015CP43578 164 aa9.41□□□□□ -0.9
LCB1YMR296C PIR5P46999 287 aa9.41□□□□□ -0.9
LCB1YMR296C RDL1Q12305 139 aaKnown RBP9.41□□□□□ -0.9
LCB1YMR296C POM34Q12445 299 aa9.41□□□□□ -0.9
LCB1YMR296C YCL048W-AQ2V2Q2 79 aa9.41□□□□□ -0.9
LCB1YMR296C YOS1Q3E834 85 aa9.41□□□□□ -0.9
LCB1YMR296C RPL9AP05738 191 aaKnown RBP9.4□□□□□ -0.9
LCB1YMR296C CDS1P38221 457 aa9.4□□□□□ -0.9
LCB1YMR296C PSD1P39006 500 aa9.4□□□□□ -0.9
LCB1YMR296C BNA2P47125 453 aa9.4□□□□□ -0.9
LCB1YMR296C FRQ1Q06389 190 aa9.4□□□□□ -0.9
LCB1YMR296C MRS3P10566 314 aa9.39□□□□□ -0.91
LCB1YMR296C FRS1P15624 595 aaKnown RBP9.39□□□□□ -0.91
LCB1YMR296C ARL3Q02804 198 aa9.39□□□□□ -0.91
LCB1YMR296C YPS3Q12303 508 aa9.39□□□□□ -0.91
LCB1YMR296C AGE2P40529 298 aa9.39□□□□□ -0.91
LCB1YMR296C YJR015WP47090 510 aa9.39□□□□□ -0.91
LCB1YMR296C YMR105W-AQ8TGS8 64 aa9.39□□□□□ -0.91
LCB1YMR296C POP7P38291 140 aa9.38□□□□□ -0.91
LCB1YMR296C DER1P38307 211 aa9.38□□□□□ -0.91
LCB1YMR296C SGN1P40561 250 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
LCB1YMR296C HIT1P46973 164 aa9.38□□□□□ -0.91
LCB1YMR296C YGL258W-AQ3E740 77 aa9.38□□□□□ -0.91
LCB1YMR296C YGL185CP53100 379 aa9.37□□□□□ -0.91
LCB1YMR296C LST7P53237 242 aa9.37□□□□□ -0.91
LCB1YMR296C BGL2P15703 313 aaKnown RBP9.36□□□□□ -0.91
LCB1YMR296C NSA2P40078 261 aaKnown RBP9.36□□□□□ -0.91
LCB1YMR296C RPL9BP51401 191 aaKnown RBP9.36□□□□□ -0.91
LCB1YMR296C YHP1Q04116 353 aa9.36□□□□□ -0.91
LCB1YMR296C NDE2Q07500 545 aa9.36□□□□□ -0.91
LCB1YMR296C SPS18P32572 300 aa9.36□□□□□ -0.91
LCB1YMR296C SSS1P35179 80 aa9.36□□□□□ -0.91
LCB1YMR296C PTC7P38797 343 aa9.36□□□□□ -0.91
LCB1YMR296C BOR1P53838 576 aa9.36□□□□□ -0.91
LCB1YMR296C STP4Q07351 490 aa9.36□□□□□ -0.91
LCB1YMR296C CSI2Q08054 341 aa9.36□□□□□ -0.91
LCB1YMR296C LAS17Q12446 633 aa9.36□□□□□ -0.91
LCB1YMR296C NHP6AP11632 93 aaKnown RBP9.35□□□□□ -0.91
LCB1YMR296C PAU5P43575 122 aa9.35□□□□□ -0.91
LCB1YMR296C ATG27P46989 271 aa9.35□□□□□ -0.91
LCB1YMR296C SHH3Q04487 196 aa9.35□□□□□ -0.91
LCB1YMR296C YOP1Q12402 180 aa9.35□□□□□ -0.91
LCB1YMR296C YMR316C-AI2HB70 103 aa9.34□□□□□ -0.91
LCB1YMR296C HSP10P38910 106 aa9.34□□□□□ -0.91
LCB1YMR296C YJL118WP47022 219 aa9.34□□□□□ -0.91
LCB1YMR296C AIM24P47127 394 aa9.34□□□□□ -0.91
LCB1YMR296C ABM1P47146 123 aa9.34□□□□□ -0.91
LCB1YMR296C PUS4P48567 403 aaKnown RBP9.34□□□□□ -0.91
LCB1YMR296C LDS2Q08218 356 aa9.34□□□□□ -0.91
LCB1YMR296C PAU19P0CE85 124 aa9.33□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms