RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W LIP2Q06005 328 aa1.53□□□□□ -2.16
HSH155YMR288W PRP11Q07350 266 aaPredicted RBP1.53□□□□□ -2.16
HSH155YMR288W SLO1Q3E784 85 aa1.53□□□□□ -2.16
HSH155YMR288W RPL2AP0CX45 254 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W RPL2BP0CX46 254 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W CNB1P25296 175 aa1.53□□□□□ -2.17
HSH155YMR288W RNA14P25298 677 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W YCR022CP25620 114 aa1.53□□□□□ -2.17
HSH155YMR288W RPC19P28000 142 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W GPX1P36014 167 aa1.53□□□□□ -2.17
HSH155YMR288W CHL4P38907 458 aa1.53□□□□□ -2.17
HSH155YMR288W RIO2P40160 425 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W APQ12P40532 138 aa1.53□□□□□ -2.17
HSH155YMR288W YIA6P40556 373 aa1.53□□□□□ -2.17
HSH155YMR288W GLR1P41921 483 aaKnown RBP1.53□□□□□ -2.17
HSH155YMR288W XPT1P47165 209 aa1.53□□□□□ -2.17
HSH155YMR288W YGL034CP53186 121 aa1.53□□□□□ -2.17
HSH155YMR288W YGR017WP53210 297 aa1.53□□□□□ -2.17
HSH155YMR288W ORM1P53224 222 aa1.53□□□□□ -2.17
HSH155YMR288W APS2Q00381 147 aa1.53□□□□□ -2.17
HSH155YMR288W YOR186WQ08560 144 aa1.53□□□□□ -2.17
HSH155YMR288W PSF1Q12488 208 aa1.53□□□□□ -2.17
HSH155YMR288W YCL021W-AQ96VH3 125 aa1.53□□□□□ -2.17
HSH155YMR288W PCL1P24867 279 aa1.52□□□□□ -2.17
HSH155YMR288W TRX3P25372 127 aa1.52□□□□□ -2.17
HSH155YMR288W APS1P35181 156 aa1.52□□□□□ -2.17
HSH155YMR288W MRPL24P36525 258 aaPredicted RBP1.52□□□□□ -2.17
HSH155YMR288W AVT5P38176 459 aa1.52□□□□□ -2.17
HSH155YMR288W YHL049CP38722 271 aa1.52□□□□□ -2.17
HSH155YMR288W YEA4P40004 342 aa1.52□□□□□ -2.17
HSH155YMR288W ECO1P43605 281 aa1.52□□□□□ -2.17
HSH155YMR288W AIM25P47140 327 aa1.52□□□□□ -2.17
HSH155YMR288W SOL1P50278 321 aa1.52□□□□□ -2.17
HSH155YMR288W SDT1P53078 280 aa1.52□□□□□ -2.17
HSH155YMR288W MRH4P53166 561 aa1.52□□□□□ -2.17
HSH155YMR288W TPC1P53257 314 aa1.52□□□□□ -2.17
HSH155YMR288W BOR1P53838 576 aa1.52□□□□□ -2.17
HSH155YMR288W GIS2P53849 153 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
HSH155YMR288W YNL010WP53981 241 aaKnown RBP1.52□□□□□ -2.17
HSH155YMR288W MAK3Q03503 176 aa1.52□□□□□ -2.17
HSH155YMR288W CGI121Q03705 181 aaKnown RBP1.52□□□□□ -2.17
HSH155YMR288W SDH7Q04401 133 aa1.52□□□□□ -2.17
HSH155YMR288W MRX8Q05473 314 aa1.52□□□□□ -2.17
HSH155YMR288W CNL1Q06333 122 aa1.52□□□□□ -2.17
HSH155YMR288W MIM1Q08176 113 aa1.52□□□□□ -2.17
HSH155YMR288W PRR2Q12310 699 aa1.52□□□□□ -2.17
HSH155YMR288W SHE2P36068 246 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
HSH155YMR288W YBR063CP38083 404 aa1.52□□□□□ -2.17
HSH155YMR288W YBL081WP38180 368 aaKnown RBP1.52□□□□□ -2.17
HSH155YMR288W AIM2P39721 246 aa1.52□□□□□ -2.17
HSH155YMR288W SER2P42941 309 aa1.52□□□□□ -2.17
HSH155YMR288W YPI1P43587 155 aa1.52□□□□□ -2.17
HSH155YMR288W YJR015WP47090 510 aa1.52□□□□□ -2.17
HSH155YMR288W YGR050CP53231 118 aa1.52□□□□□ -2.17
HSH155YMR288W RNH201P53942 307 aa1.52□□□□□ -2.17
HSH155YMR288W LSM3P57743 89 aaKnown RBP1.52□□□□□ -2.17
HSH155YMR288W YKR005CQ02203 525 aa1.52□□□□□ -2.17
HSH155YMR288W COF1Q03048 143 aaKnown RBP1.52□□□□□ -2.17
HSH155YMR288W YML018CQ03730 393 aa1.52□□□□□ -2.17
HSH155YMR288W RAV2Q03956 351 aa1.52□□□□□ -2.17
HSH155YMR288W SHH4Q06236 168 aa1.52□□□□□ -2.17
HSH155YMR288W MCH1Q07376 486 aa1.52□□□□□ -2.17
HSH155YMR288W STE7P06784 515 aa1.51□□□□□ -2.17
HSH155YMR288W SPO13P23624 291 aa1.51□□□□□ -2.17
HSH155YMR288W SEC14P24280 304 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W INO2P26798 304 aa1.51□□□□□ -2.17
HSH155YMR288W ARO2P28777 376 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W YOR062CP36025 268 aa1.51□□□□□ -2.17
HSH155YMR288W OST1P41543 476 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W ARP3P47117 449 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W YAE1P47118 141 aaPredicted RBP1.51□□□□□ -2.17
HSH155YMR288W RPS12P48589 143 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W YGL101WP53144 215 aa1.51□□□□□ -2.17
HSH155YMR288W CAB4P53332 305 aa1.51□□□□□ -2.17
HSH155YMR288W PGA1P53896 198 aa1.51□□□□□ -2.17
HSH155YMR288W YMR181CQ03231 154 aa1.51□□□□□ -2.17
HSH155YMR288W DIG2Q03373 323 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W TMA23Q03525 211 aa1.51□□□□□ -2.17
HSH155YMR288W TDA1Q03533 586 aa1.51□□□□□ -2.17
HSH155YMR288W SNX3Q08826 162 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W FSF1Q12029 327 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W FCF2Q12035 217 aaPredicted RBP1.51□□□□□ -2.17
HSH155YMR288W YDL180WQ12301 547 aa1.51□□□□□ -2.17
HSH155YMR288W HTZ1Q12692 134 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W YIR021W-AQ3E739 70 aa1.51□□□□□ -2.17
HSH155YMR288W DDI2P0CH63 225 aa1.51□□□□□ -2.17
HSH155YMR288W DDI3P0CH64 225 aa1.51□□□□□ -2.17
HSH155YMR288W PAN3P36102 679 aaPredicted RBP1.51□□□□□ -2.17
HSH155YMR288W CSH1P38287 376 aa1.51□□□□□ -2.17
HSH155YMR288W RPS20P38701 121 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W DFG10P40526 253 aa1.51□□□□□ -2.17
HSH155YMR288W HHO1P53551 258 aa1.51□□□□□ -2.17
HSH155YMR288W YDR124WQ04608 324 aa1.51□□□□□ -2.17
HSH155YMR288W YOL160WQ08321 113 aa1.51□□□□□ -2.17
HSH155YMR288W SYC1Q08553 188 aaPredicted RBP1.51□□□□□ -2.17
HSH155YMR288W DGA1Q08650 418 aa1.51□□□□□ -2.17
HSH155YMR288W SCP1Q08873 200 aa1.51□□□□□ -2.17
HSH155YMR288W ATP16Q12165 160 aa1.51□□□□□ -2.17
HSH155YMR288W MPD1Q12404 318 aaKnown RBP1.51□□□□□ -2.17
HSH155YMR288W YCR024C-BQ3E7Z8 88 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms