RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	DER1	P38307	211 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	EDC3	P39998	551 aa	Known RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	YNL200C	P40165	246 aa	Known RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	SBH1	P52870	82 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	MPA43	P53583	542 aa	Predicted RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	YNL033W	P53964	284 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	GAL83	Q04739	417 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	RNH202	Q05635	350 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YLR162W	Q06235	118 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	DAS2	Q12084	232 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	ATP20	Q12233	115 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	RPS28B	P0C0X0	67 aa	Known RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	UBC6	P33296	250 aa	Predicted RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	FYV4	P38783	130 aa	Predicted RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	YER135C	P40082	130 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YFH7	P43591	353 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	XPT1	P47165	209 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YGL235W	P53071	178 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YGL101W	P53144	215 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YPR174C	Q06616	221 aa	Predicted RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	CSI2	Q08054	341 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	NSL1	Q12143	216 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	YPR013C	Q12145	317 aa		0.73	□□□□□ -2.29
SPT21	YMR179W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	YCR023C	P25351	611 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	STP22	P25604	385 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	RRT1	P38192	103 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	YHL018W	P38744	120 aa	Predicted RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	TIM13	P53299	105 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	THI74	Q04083	370 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	YPR127W	Q06494	345 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	YHR007C-A	Q07074	71 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	PRP11	Q07350	266 aa	Predicted RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	YOR214C	Q12282	236 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	MDM35	O60200	86 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	YGL010W	P25338	174 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	UPS2	P35200	230 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	FIG1	P38224	298 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	YBR220C	P38318	560 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	RPL13B	P40212	199 aa	Known RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	EFM5	P53200	248 aa	Known RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	DAD4	P69851	72 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	TMA20	P89886	181 aa	Predicted RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	VPS28	Q02767	242 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	MAK3	Q03503	176 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	FIT2	Q08906	153 aa		0.72	□□□□□ -2.29
SPT21	YMR179W	RPL13A	Q12690	199 aa	Predicted RBP	0.72	□□□□□ -2.29
SPT21	YMR179W	COX8	P04039	78 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	QCR8	P08525	94 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	YOL162W	P0CF19	215 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	RPL2A	P0CX45	254 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	RPL2B	P0CX46	254 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	GPA2	P10823	449 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	HSP30	P25619	332 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	NUF2	P33895	451 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	SBH2	P52871	88 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	THG1	P53215	237 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	YKR005C	Q02203	525 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	YDR476C	Q03362	224 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	MSB2	P32334	1306 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	RAD6	P06104	172 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	UBI4	P0CG63	381 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	GSP2	P32836	220 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	SFK1	P35735	353 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	GLR1	P41921	483 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	ORM1	P53224	222 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	YPR202W	Q08993	238 aa		0.71	□□□□□ -2.3
SPT21	YMR179W	PST2	Q12335	198 aa	Known RBP	0.71	□□□□□ -2.3
SPT21	YMR179W	SLM6	P38343	150 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	LSM3	P57743	89 aa	Known RBP	0.7	□□□□□ -2.3
SPT21	YMR179W	GRX5	Q02784	150 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	PIR1	Q03178	341 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	YOR015W	Q12169	119 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	EFG1	Q3E705	233 aa	Known RBP	0.7	□□□□□ -2.3
SPT21	YMR179W	YOR381W-A	Q3E804	55 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	PET20	Q99373	253 aa		0.7	□□□□□ -2.3
SPT21	YMR179W	FPR1	P20081	114 aa	Known RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	BUB2	P26448	306 aa	Predicted RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	YEL073C	P39974	107 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	YEL028W	P39989	153 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	RIO2	P40160	425 aa	Known RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	FLX1	P40464	311 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	NSE4	P43124	402 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	DML1	Q03652	475 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	RIM9	Q04734	239 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	UPS1	Q05776	175 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	PBI2	P0CT04	75 aa	Known RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	PEX34	P25584	144 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	PTC1	P35182	281 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	HPA3	P39979	161 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	HYR1	P40581	163 aa	Known RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	ALB1	P47019	175 aa	Predicted RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	RCE1	Q03530	315 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	RRP17	Q04031	235 aa	Predicted RBP	0.69	□□□□□ -2.3
SPT21	YMR179W	YHP1	Q04116	353 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	SYM1	Q06563	197 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	ATG41	Q12048	136 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	YLR046C	Q12253	270 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	YNL146C-A	Q3E7Z1	64 aa		0.69	□□□□□ -2.3
SPT21	YMR179W	TRM3	Q07527	1436 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms