RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C YPL264CQ08980 353 aa4.34□□□□□ -1.71
SEC39YLR440C RPL7AP05737 244 aaKnown RBP4.34□□□□□ -1.71
SEC39YLR440C RPL11AP0C0W9 174 aaKnown RBP4.34□□□□□ -1.71
SEC39YLR440C KAR4P25583 335 aa4.34□□□□□ -1.71
SEC39YLR440C ERG24P32462 438 aaKnown RBP4.34□□□□□ -1.71
SEC39YLR440C MTC7P32633 139 aa4.34□□□□□ -1.71
SEC39YLR440C ZRT1P32804 376 aa4.34□□□□□ -1.71
SEC39YLR440C VMA11P32842 164 aa4.34□□□□□ -1.71
SEC39YLR440C SOR1P35497 357 aaKnown RBP4.34□□□□□ -1.71
SEC39YLR440C MED6P38782 295 aa4.34□□□□□ -1.71
SEC39YLR440C MSL1P40567 111 aaPredicted RBP4.34□□□□□ -1.71
SEC39YLR440C VMA21P41806 77 aa4.34□□□□□ -1.71
SEC39YLR440C ARP3P47117 449 aaKnown RBP4.34□□□□□ -1.71
SEC39YLR440C HST4P53688 370 aa4.34□□□□□ -1.71
SEC39YLR440C YMR103CQ04436 120 aa4.34□□□□□ -1.71
SEC39YLR440C SHH4Q06236 168 aa4.34□□□□□ -1.71
SEC39YLR440C SOR2Q07786 357 aa4.34□□□□□ -1.71
SEC39YLR440C RPL11BQ3E757 174 aaPredicted RBP4.34□□□□□ -1.71
SEC39YLR440C MBF1O14467 151 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C RPS2P25443 254 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C YCR090CP25654 182 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C RFA2P26754 273 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C YSC84P32793 468 aa4.33□□□□□ -1.72
SEC39YLR440C ATG12P38316 186 aa4.33□□□□□ -1.72
SEC39YLR440C PRM5P40476 318 aa4.33□□□□□ -1.72
SEC39YLR440C BAT2P47176 376 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C ATP23P53722 227 aa4.33□□□□□ -1.72
SEC39YLR440C PGA1P53896 198 aa4.33□□□□□ -1.72
SEC39YLR440C YNL033WP53964 284 aa4.33□□□□□ -1.72
SEC39YLR440C YNL019CP53975 284 aa4.33□□□□□ -1.72
SEC39YLR440C LEE1Q02799 301 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C ERF2Q06551 359 aa4.33□□□□□ -1.72
SEC39YLR440C RPS10AQ08745 105 aaPredicted RBP4.33□□□□□ -1.72
SEC39YLR440C PRM3Q08931 133 aa4.33□□□□□ -1.72
SEC39YLR440C YDR029WQ12111 104 aa4.33□□□□□ -1.72
SEC39YLR440C SME1Q12330 94 aaPredicted RBP4.33□□□□□ -1.72
SEC39YLR440C YBL112CQ3E7Y4 105 aa4.33□□□□□ -1.72
SEC39YLR440C ADH1P00330 348 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C LRE1P25579 583 aaKnown RBP4.33□□□□□ -1.72
SEC39YLR440C FLX1P40464 311 aa4.33□□□□□ -1.72
SEC39YLR440C FIT3Q08907 204 aa4.33□□□□□ -1.72
SEC39YLR440C YPS3Q12303 508 aa4.33□□□□□ -1.72
SEC39YLR440C RNH203Q12338 110 aa4.33□□□□□ -1.72
SEC39YLR440C CPA1P07258 411 aaKnown RBP4.32□□□□□ -1.72
SEC39YLR440C HSP26P15992 214 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SEC39YLR440C ARC40P38328 384 aaKnown RBP4.32□□□□□ -1.72
SEC39YLR440C BET5Q03630 159 aa4.32□□□□□ -1.72
SEC39YLR440C GAS3Q03655 524 aa4.32□□□□□ -1.72
SEC39YLR440C YMR082CQ04276 118 aa4.32□□□□□ -1.72
SEC39YLR440C YOR097CQ12274 175 aaPredicted RBP4.32□□□□□ -1.72
SEC39YLR440C IZH2Q12442 317 aa4.32□□□□□ -1.72
SEC39YLR440C COX1P00401 534 aa4.31□□□□□ -1.72
SEC39YLR440C RPS25BP0C0T4 108 aaKnown RBP4.31□□□□□ -1.72
SEC39YLR440C GLC7P32598 312 aaKnown RBP4.31□□□□□ -1.72
SEC39YLR440C MID1P41821 548 aa4.31□□□□□ -1.72
SEC39YLR440C ERV29P53337 310 aa4.31□□□□□ -1.72
SEC39YLR440C RPS25AQ3E792 108 aaPredicted RBP4.31□□□□□ -1.72
SEC39YLR440C SUS1Q6WNK7 96 aa4.31□□□□□ -1.72
SEC39YLR440C ECM12O13529 151 aa4.31□□□□□ -1.72
SEC39YLR440C RPL30P14120 105 aaKnown RBP4.31□□□□□ -1.72
SEC39YLR440C MIG1P27705 504 aa4.31□□□□□ -1.72
SEC39YLR440C SRP21P32342 167 aa4.31□□□□□ -1.72
SEC39YLR440C JJJ3P47138 172 aa4.31□□□□□ -1.72
SEC39YLR440C BXI1P48558 297 aa4.31□□□□□ -1.72
SEC39YLR440C GRX5Q02784 150 aa4.31□□□□□ -1.72
SEC39YLR440C FIT1Q04433 528 aa4.31□□□□□ -1.72
SEC39YLR440C YPR098CQ06089 161 aa4.31□□□□□ -1.72
SEC39YLR440C MRH1Q12117 320 aaPredicted RBP4.31□□□□□ -1.72
SEC39YLR440C OPI3P05375 206 aa4.3□□□□□ -1.72
SEC39YLR440C MRS3P10566 314 aa4.3□□□□□ -1.72
SEC39YLR440C CKS1P20486 150 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C GAS1P22146 559 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C YMC1P32331 307 aa4.3□□□□□ -1.72
SEC39YLR440C NNK1P36003 928 aa4.3□□□□□ -1.72
SEC39YLR440C MST28P39552 234 aa4.3□□□□□ -1.72
SEC39YLR440C YIL029CP40538 142 aa4.3□□□□□ -1.72
SEC39YLR440C ATG27P46989 271 aa4.3□□□□□ -1.72
SEC39YLR440C SCW4P53334 386 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C YPR174CQ06616 221 aaPredicted RBP4.3□□□□□ -1.72
SEC39YLR440C MCA1Q08601 432 aa4.3□□□□□ -1.72
SEC39YLR440C EAF3Q12432 401 aa4.3□□□□□ -1.72
SEC39YLR440C RIF1P29539 1916 aa4.3□□□□□ -1.72
SEC39YLR440C RAS2P01120 322 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C MSI1P13712 422 aa4.3□□□□□ -1.72
SEC39YLR440C TOM40P23644 387 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C ISC1P40015 477 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C YPL039WQ03080 316 aa4.3□□□□□ -1.72
SEC39YLR440C YMR090WQ04304 227 aaKnown RBP4.3□□□□□ -1.72
SEC39YLR440C YDL218WQ07629 317 aa4.3□□□□□ -1.72
SEC39YLR440C HRT1Q08273 121 aa4.3□□□□□ -1.72
SEC39YLR440C ARF2P19146 181 aaKnown RBP4.29□□□□□ -1.72
SEC39YLR440C PRO1P32264 428 aa4.29□□□□□ -1.72
SEC39YLR440C YKL102CP34249 101 aa4.29□□□□□ -1.72
SEC39YLR440C CCS1P40202 249 aaKnown RBP4.29□□□□□ -1.72
SEC39YLR440C CWP2P43497 92 aa4.29□□□□□ -1.72
SEC39YLR440C AIM25P47140 327 aa4.29□□□□□ -1.72
SEC39YLR440C SCW11P53189 542 aa4.29□□□□□ -1.72
SEC39YLR440C YGR164WP53291 111 aa4.29□□□□□ -1.72
SEC39YLR440C SLG1P54867 378 aa4.29□□□□□ -1.72
SEC39YLR440C IES4Q08561 116 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms