RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W PDR17P53844 350 aa3.72□□□□□ -1.81
CBF5YLR175W APJ1P53940 528 aa3.72□□□□□ -1.81
CBF5YLR175W RPL15BP54780 204 aaPredicted RBP3.72□□□□□ -1.81
CBF5YLR175W YMR317WQ04893 1140 aa3.72□□□□□ -1.81
CBF5YLR175W YLR179CQ06252 201 aaKnown RBP3.72□□□□□ -1.81
CBF5YLR175W PRR2Q12310 699 aa3.72□□□□□ -1.81
CBF5YLR175W RAX2Q12465 1220 aa3.72□□□□□ -1.81
CBF5YLR175W SHG1P38337 142 aa3.71□□□□□ -1.82
CBF5YLR175W COX15P40086 486 aa3.71□□□□□ -1.82
CBF5YLR175W YIP1P53039 248 aa3.71□□□□□ -1.82
CBF5YLR175W SSU72P53538 206 aaPredicted RBP3.71□□□□□ -1.82
CBF5YLR175W YNR066CP53752 436 aa3.71□□□□□ -1.82
CBF5YLR175W HCH1P53834 153 aa3.71□□□□□ -1.82
CBF5YLR175W YCL001W-AP87012 153 aa3.71□□□□□ -1.82
CBF5YLR175W MRPS17Q03246 237 aaPredicted RBP3.71□□□□□ -1.82
CBF5YLR175W DCS1Q06151 350 aa3.71□□□□□ -1.82
CBF5YLR175W AGC1Q12482 902 aa3.71□□□□□ -1.82
CBF5YLR175W YER145C-AA0A023PYF4 145 aa3.7□□□□□ -1.82
CBF5YLR175W YCR025CP25352 136 aa3.7□□□□□ -1.82
CBF5YLR175W YCL042WP25572 119 aa3.7□□□□□ -1.82
CBF5YLR175W SUA7P29055 345 aaPredicted RBP3.7□□□□□ -1.82
CBF5YLR175W FPR2P32472 135 aa3.7□□□□□ -1.82
CBF5YLR175W YBR292CP38357 123 aa3.7□□□□□ -1.82
CBF5YLR175W SPC25P40014 221 aa3.7□□□□□ -1.82
CBF5YLR175W DFG10P40526 253 aa3.7□□□□□ -1.82
CBF5YLR175W EMC5P40540 141 aa3.7□□□□□ -1.82
CBF5YLR175W YJR056CP47115 236 aa3.7□□□□□ -1.82
CBF5YLR175W YAP1802P53309 568 aa3.7□□□□□ -1.82
CBF5YLR175W RAD28Q12021 506 aa3.7□□□□□ -1.82
CBF5YLR175W ATP14Q12349 124 aa3.7□□□□□ -1.82
CBF5YLR175W ATO3Q12359 275 aa3.7□□□□□ -1.82
CBF5YLR175W HTB1P02293 131 aaKnown RBP3.69□□□□□ -1.82
CBF5YLR175W URA5P13298 226 aaKnown RBP3.69□□□□□ -1.82
CBF5YLR175W NOP1P15646 327 aaKnown RBP3.69□□□□□ -1.82
CBF5YLR175W PHO85P17157 305 aa3.69□□□□□ -1.82
CBF5YLR175W ZRC1P20107 442 aa3.69□□□□□ -1.82
CBF5YLR175W RPB9P27999 122 aa3.69□□□□□ -1.82
CBF5YLR175W UPS2P35200 230 aa3.69□□□□□ -1.82
CBF5YLR175W MIA40P36046 403 aa3.69□□□□□ -1.82
CBF5YLR175W HXT14P42833 540 aa3.69□□□□□ -1.82
CBF5YLR175W YNL234WP53857 426 aa3.69□□□□□ -1.82
CBF5YLR175W ODC1Q03028 310 aa3.69□□□□□ -1.82
CBF5YLR175W FRQ1Q06389 190 aa3.69□□□□□ -1.82
CBF5YLR175W ARR3Q06598 404 aa3.69□□□□□ -1.82
CBF5YLR175W SDO1Q07953 250 aaKnown RBP3.69□□□□□ -1.82
CBF5YLR175W FCY2P17064 533 aa3.68□□□□□ -1.82
CBF5YLR175W ACP1P32463 125 aa3.68□□□□□ -1.82
CBF5YLR175W RAD23P32628 398 aaKnown RBP3.68□□□□□ -1.82
CBF5YLR175W YKR045CP36138 183 aa3.68□□□□□ -1.82
CBF5YLR175W NSA2P40078 261 aaKnown RBP3.68□□□□□ -1.82
CBF5YLR175W YGR269WP40326 108 aa3.68□□□□□ -1.82
CBF5YLR175W YDL242WQ07746 117 aa3.68□□□□□ -1.82
CBF5YLR175W RKI1Q12189 258 aa3.68□□□□□ -1.82
CBF5YLR175W COX19Q3E731 98 aa3.68□□□□□ -1.82
CBF5YLR175W ILV5P06168 395 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W RPS25BP0C0T4 108 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W QCR9P22289 66 aa3.67□□□□□ -1.82
CBF5YLR175W TOM40P23644 387 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W AHT1P29589 182 aa3.67□□□□□ -1.82
CBF5YLR175W ECM25P32525 599 aa3.67□□□□□ -1.82
CBF5YLR175W SHB17P36136 271 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W WSS1P38838 269 aa3.67□□□□□ -1.82
CBF5YLR175W SMD3P43321 101 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W SNN1P48232 102 aa3.67□□□□□ -1.82
CBF5YLR175W YGR151CP53287 111 aa3.67□□□□□ -1.82
CBF5YLR175W CRH1P53301 507 aa3.67□□□□□ -1.82
CBF5YLR175W CAF40P53829 373 aa3.67□□□□□ -1.82
CBF5YLR175W BOR1P53838 576 aa3.67□□□□□ -1.82
CBF5YLR175W FMP41P53889 259 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W DYN2Q02647 92 aa3.67□□□□□ -1.82
CBF5YLR175W YMR166CQ03829 368 aa3.67□□□□□ -1.82
CBF5YLR175W RPS25AQ3E792 108 aaPredicted RBP3.67□□□□□ -1.82
CBF5YLR175W SOD1P00445 154 aaKnown RBP3.67□□□□□ -1.82
CBF5YLR175W LDS1P31379 325 aa3.67□□□□□ -1.82
CBF5YLR175W MSK1P32048 576 aa3.67□□□□□ -1.82
CBF5YLR175W YJL213WP40896 331 aa3.67□□□□□ -1.82
CBF5YLR175W LST8P41318 303 aa3.67□□□□□ -1.82
CBF5YLR175W RIB4P50861 169 aaPredicted RBP3.67□□□□□ -1.82
CBF5YLR175W YPL108WQ02872 168 aaPredicted RBP3.67□□□□□ -1.82
CBF5YLR175W ADD37Q03233 198 aa3.67□□□□□ -1.82
CBF5YLR175W TMA23Q03525 211 aa3.67□□□□□ -1.82
CBF5YLR175W MCH1Q07376 486 aa3.67□□□□□ -1.82
CBF5YLR175W IZH3Q07959 543 aa3.67□□□□□ -1.82
CBF5YLR175W USV1Q12132 391 aa3.67□□□□□ -1.82
CBF5YLR175W FCY1Q12178 158 aa3.67□□□□□ -1.82
CBF5YLR175W POC4Q12245 148 aaPredicted RBP3.67□□□□□ -1.82
CBF5YLR175W JID1Q12350 301 aa3.67□□□□□ -1.82
CBF5YLR175W MRS3P10566 314 aa3.66□□□□□ -1.82
CBF5YLR175W SRB6P32570 121 aa3.66□□□□□ -1.82
CBF5YLR175W YBL071CP38185 102 aa3.66□□□□□ -1.82
CBF5YLR175W QDR3P38227 689 aa3.66□□□□□ -1.82
CBF5YLR175W CSH1P38287 376 aa3.66□□□□□ -1.82
CBF5YLR175W YAR068WP39564 161 aa3.66□□□□□ -1.82
CBF5YLR175W YER188WP40103 239 aa3.66□□□□□ -1.82
CBF5YLR175W SAS2P40963 338 aa3.66□□□□□ -1.82
CBF5YLR175W YOR015WQ12169 119 aa3.66□□□□□ -1.82
CBF5YLR175W YOR097CQ12274 175 aaPredicted RBP3.66□□□□□ -1.82
CBF5YLR175W VMA9Q3E7B6 73 aa3.66□□□□□ -1.82
CBF5YLR175W TDH1P00360 332 aaKnown RBP3.65□□□□□ -1.83
CBF5YLR175W PIS1P06197 220 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms