RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C ARR3Q06598 404 aa9.39□□□□□ -0.91
SPT8YLR055C YOR292CQ08743 309 aa9.39□□□□□ -0.91
SPT8YLR055C SAG1P20840 650 aa9.38□□□□□ -0.91
SPT8YLR055C YBL059WP34224 193 aa9.38□□□□□ -0.91
SPT8YLR055C YMR262WP38430 313 aa9.38□□□□□ -0.91
SPT8YLR055C UIP3P39547 235 aa9.38□□□□□ -0.91
SPT8YLR055C YER079WP40052 210 aaKnown RBP9.38□□□□□ -0.91
SPT8YLR055C COX15P40086 486 aa9.38□□□□□ -0.91
SPT8YLR055C YGR050CP53231 118 aa9.38□□□□□ -0.91
SPT8YLR055C YMR007WQ03675 126 aa9.38□□□□□ -0.91
SPT8YLR055C RPS22AP0C0W1 130 aaKnown RBP9.38□□□□□ -0.91
SPT8YLR055C DEG1P31115 442 aaKnown RBP9.38□□□□□ -0.91
SPT8YLR055C CUE1P38428 203 aa9.38□□□□□ -0.91
SPT8YLR055C PCL7P40186 285 aa9.38□□□□□ -0.91
SPT8YLR055C TCA17P32613 152 aa9.37□□□□□ -0.91
SPT8YLR055C NTC20P38302 140 aaPredicted RBP9.37□□□□□ -0.91
SPT8YLR055C PRM5P40476 318 aa9.37□□□□□ -0.91
SPT8YLR055C MRP51Q02950 344 aa9.37□□□□□ -0.91
SPT8YLR055C RIM9Q04734 239 aa9.37□□□□□ -0.91
SPT8YLR055C ATG40Q99325 256 aa9.37□□□□□ -0.91
SPT8YLR055C MEC1P38111 2368 aa9.37□□□□□ -0.91
SPT8YLR055C CRH1P53301 507 aa9.36□□□□□ -0.91
SPT8YLR055C PKR1Q03880 122 aaKnown RBP9.36□□□□□ -0.91
SPT8YLR055C YMR254CQ04838 102 aa9.36□□□□□ -0.91
SPT8YLR055C LDS2Q08218 356 aa9.36□□□□□ -0.91
SPT8YLR055C NAT5Q08689 176 aa9.36□□□□□ -0.91
SPT8YLR055C MPD1Q12404 318 aaKnown RBP9.36□□□□□ -0.91
SPT8YLR055C GPI2P46961 280 aa9.35□□□□□ -0.91
SPT8YLR055C TNA1P53322 534 aa9.35□□□□□ -0.91
SPT8YLR055C RPL9AP05738 191 aaKnown RBP9.35□□□□□ -0.91
SPT8YLR055C RPL31AP0C2H8 113 aaKnown RBP9.35□□□□□ -0.91
SPT8YLR055C RPL31BP0C2H9 113 aaKnown RBP9.35□□□□□ -0.91
SPT8YLR055C MCH2P36032 473 aa9.35□□□□□ -0.91
SPT8YLR055C RPB11P38902 120 aa9.35□□□□□ -0.91
SPT8YLR055C CDC40P40968 455 aaPredicted RBP9.35□□□□□ -0.91
SPT8YLR055C RPL9BP51401 191 aaKnown RBP9.35□□□□□ -0.91
SPT8YLR055C COQ11Q05892 277 aa9.35□□□□□ -0.91
SPT8YLR055C LOA1Q06508 300 aa9.35□□□□□ -0.91
SPT8YLR055C NCE102Q12207 173 aaRIP-Chip data9.35□□□□□ -0.91not detected
SPT8YLR055C COX17Q12287 69 aa9.35□□□□□ -0.91
SPT8YLR055C IMP1P28627 190 aa9.34□□□□□ -0.91
SPT8YLR055C SPS18P32572 300 aa9.34□□□□□ -0.91
SPT8YLR055C YIP5P53108 310 aa9.34□□□□□ -0.91
SPT8YLR055C YIL029CP40538 142 aa9.33□□□□□ -0.92
SPT8YLR055C TAF4P50105 388 aa9.33□□□□□ -0.92
SPT8YLR055C YPL077CQ02831 240 aa9.33□□□□□ -0.92
SPT8YLR055C PRP11Q07350 266 aaPredicted RBP9.33□□□□□ -0.92
SPT8YLR055C YOR105WQ08504 108 aa9.33□□□□□ -0.92
SPT8YLR055C MSI1P13712 422 aa9.33□□□□□ -0.92
SPT8YLR055C DER1P38307 211 aa9.33□□□□□ -0.92
SPT8YLR055C YDL180WQ12301 547 aa9.33□□□□□ -0.92
SPT8YLR055C SMT3Q12306 101 aaKnown RBP9.33□□□□□ -0.92
SPT8YLR055C TMA7Q3E764 64 aaKnown RBP9.33□□□□□ -0.92
SPT8YLR055C HMX1P32339 317 aa9.32□□□□□ -0.92
SPT8YLR055C MRPL39P36533 70 aa9.32□□□□□ -0.92
SPT8YLR055C XPT1P47165 209 aa9.32□□□□□ -0.92
SPT8YLR055C HRD1Q08109 551 aa9.32□□□□□ -0.92
SPT8YLR055C WTM2Q12206 467 aa9.32□□□□□ -0.92
SPT8YLR055C POC4Q12245 148 aaPredicted RBP9.32□□□□□ -0.92
SPT8YLR055C AGE2P40529 298 aa9.31□□□□□ -0.92
SPT8YLR055C ARP3P47117 449 aaKnown RBP9.31□□□□□ -0.92
SPT8YLR055C RPL21AQ02753 160 aaKnown RBP9.31□□□□□ -0.92
SPT8YLR055C RPL21BQ12672 160 aaKnown RBP9.31□□□□□ -0.92
SPT8YLR055C SUA7P29055 345 aaPredicted RBP9.31□□□□□ -0.92
SPT8YLR055C CYB5P40312 120 aa9.31□□□□□ -0.92
SPT8YLR055C FIT3Q08907 204 aa9.31□□□□□ -0.92
SPT8YLR055C HAP3P13434 144 aa9.3□□□□□ -0.92
SPT8YLR055C MIX23P38162 196 aa9.3□□□□□ -0.92
SPT8YLR055C OST1P41543 476 aaKnown RBP9.3□□□□□ -0.92
SPT8YLR055C WSC2P53832 503 aa9.3□□□□□ -0.92
SPT8YLR055C IZH1Q03419 316 aa9.3□□□□□ -0.92
SPT8YLR055C RAF1Q06891 181 aa9.3□□□□□ -0.92
SPT8YLR055C BOL1Q3E793 110 aa9.3□□□□□ -0.92
SPT8YLR055C MTC6P38849 526 aa9.29□□□□□ -0.92
SPT8YLR055C SRP14P38985 146 aa9.29□□□□□ -0.92
SPT8YLR055C YCK3P39962 524 aa9.29□□□□□ -0.92
SPT8YLR055C CWC27Q02770 301 aa9.29□□□□□ -0.92
SPT8YLR055C UPS1Q05776 175 aa9.29□□□□□ -0.92
SPT8YLR055C FOL3Q12676 427 aaPredicted RBP9.29□□□□□ -0.92
SPT8YLR055C RNA15P25299 296 aaPredicted RBP9.28□□□□□ -0.92
SPT8YLR055C YER134CP40081 178 aa9.28□□□□□ -0.92
SPT8YLR055C YIL163CP40448 117 aa9.28□□□□□ -0.92
SPT8YLR055C DFG10P40526 253 aa9.28□□□□□ -0.92
SPT8YLR055C MRPL19P53875 158 aa9.28□□□□□ -0.92
SPT8YLR055C YPL067CQ02754 198 aa9.28□□□□□ -0.92
SPT8YLR055C MCH1Q07376 486 aa9.28□□□□□ -0.92
SPT8YLR055C CSI2Q08054 341 aa9.28□□□□□ -0.92
SPT8YLR055C POM34Q12445 299 aa9.28□□□□□ -0.92
SPT8YLR055C MIG1P27705 504 aa9.28□□□□□ -0.92
SPT8YLR055C YKL102CP34249 101 aa9.28□□□□□ -0.92
SPT8YLR055C ELF1P36053 145 aa9.28□□□□□ -0.92
SPT8YLR055C PHD1P36093 366 aa9.28□□□□□ -0.92
SPT8YLR055C DUG3P53871 357 aa9.28□□□□□ -0.92
SPT8YLR055C ECM18Q04623 453 aa9.28□□□□□ -0.92
SPT8YLR055C GEP5Q12393 293 aa9.28□□□□□ -0.92
SPT8YLR055C AME1P38313 324 aa9.27□□□□□ -0.93
SPT8YLR055C YJR015WP47090 510 aa9.27□□□□□ -0.93
SPT8YLR055C DSK2P48510 373 aa9.27□□□□□ -0.93
SPT8YLR055C BOR1P53838 576 aa9.27□□□□□ -0.93
SPT8YLR055C TPT1Q12272 230 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms