RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W DOC1P53068 250 aa3.75□□□□□ -1.81
LDB18YLL049W MST27P53176 234 aa3.75□□□□□ -1.81
LDB18YLL049W TSA2Q04120 196 aa3.75□□□□□ -1.81
LDB18YLL049W ORM2Q06144 216 aa3.75□□□□□ -1.81
LDB18YLL049W AGC1Q12482 902 aa3.75□□□□□ -1.81
LDB18YLL049W TAL1P15019 335 aaKnown RBP3.74□□□□□ -1.81
LDB18YLL049W CUP2P15315 225 aa3.74□□□□□ -1.81
LDB18YLL049W UPS2P35200 230 aa3.74□□□□□ -1.81
LDB18YLL049W YHR138CP38841 114 aaPredicted RBP3.74□□□□□ -1.81
LDB18YLL049W SMB1P40018 196 aaKnown RBP3.74□□□□□ -1.81
LDB18YLL049W AIM20P40451 204 aa3.74□□□□□ -1.81
LDB18YLL049W SAS2P40963 338 aa3.74□□□□□ -1.81
LDB18YLL049W TLG1Q03322 224 aa3.74□□□□□ -1.81
LDB18YLL049W HRD1Q08109 551 aa3.74□□□□□ -1.81
LDB18YLL049W VAM10Q08474 114 aa3.74□□□□□ -1.81
LDB18YLL049W SEN2P16658 377 aa3.73□□□□□ -1.81
LDB18YLL049W DOG2P38773 246 aa3.73□□□□□ -1.81
LDB18YLL049W DOG1P38774 246 aa3.73□□□□□ -1.81
LDB18YLL049W SNL1P40548 159 aa3.73□□□□□ -1.81
LDB18YLL049W RPA34P47006 233 aaPredicted RBP3.73□□□□□ -1.81
LDB18YLL049W PHO92Q06390 306 aa3.73□□□□□ -1.81
LDB18YLL049W FEX1Q08913 375 aa3.73□□□□□ -1.81
LDB18YLL049W FEX2Q08991 375 aa3.73□□□□□ -1.81
LDB18YLL049W YLR112WQ12130 139 aa3.73□□□□□ -1.81
LDB18YLL049W YGK3Q12222 375 aaPredicted RBP3.73□□□□□ -1.81
LDB18YLL049W HUG1Q6Q5K6 68 aa3.73□□□□□ -1.81
LDB18YLL049W ODC2Q99297 307 aa3.73□□□□□ -1.81
LDB18YLL049W MIR1P23641 311 aaKnown RBP3.72□□□□□ -1.81
LDB18YLL049W YCR007CP25354 239 aa3.72□□□□□ -1.81
LDB18YLL049W VMA22P38784 181 aa3.72□□□□□ -1.81
LDB18YLL049W NVJ1P38881 321 aa3.72□□□□□ -1.81
LDB18YLL049W POR2P40478 281 aa3.72□□□□□ -1.81
LDB18YLL049W FMP33P46998 180 aa3.72□□□□□ -1.81
LDB18YLL049W ARO8P53090 500 aaKnown RBP3.72□□□□□ -1.81
LDB18YLL049W MSO1P53604 210 aaKnown RBP3.72□□□□□ -1.81
LDB18YLL049W SGF11Q03067 99 aa3.72□□□□□ -1.81
LDB18YLL049W LCL2Q08045 131 aa3.72□□□□□ -1.81
LDB18YLL049W TIM18Q08749 192 aa3.72□□□□□ -1.81
LDB18YLL049W RAD28Q12021 506 aa3.72□□□□□ -1.81
LDB18YLL049W URA6P15700 204 aa3.71□□□□□ -1.82
LDB18YLL049W YNL200CP40165 246 aaKnown RBP3.71□□□□□ -1.82
LDB18YLL049W GVP36P40531 326 aaKnown RBP3.71□□□□□ -1.82
LDB18YLL049W BNA6P43619 295 aa3.71□□□□□ -1.82
LDB18YLL049W YIF1P53845 314 aaKnown RBP3.71□□□□□ -1.82
LDB18YLL049W YNG1Q08465 219 aa3.71□□□□□ -1.82
LDB18YLL049W TIR4Q12218 487 aaPredicted RBP3.71□□□□□ -1.82
LDB18YLL049W YEL009C-AA0A023PZF2 135 aa3.7□□□□□ -1.82
LDB18YLL049W HIS3P06633 220 aa3.7□□□□□ -1.82
LDB18YLL049W RTS2P40962 232 aa3.7□□□□□ -1.82
LDB18YLL049W CRC1Q12289 327 aa3.7□□□□□ -1.82
LDB18YLL049W FAR1P21268 830 aa3.69□□□□□ -1.82
LDB18YLL049W SHE2P36068 246 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
LDB18YLL049W EGD2P38879 174 aaKnown RBP3.69□□□□□ -1.82
LDB18YLL049W RTT105P40063 208 aa3.69□□□□□ -1.82
LDB18YLL049W YIL024CP40543 189 aa3.69□□□□□ -1.82
LDB18YLL049W SNX4P47057 423 aa3.69□□□□□ -1.82
LDB18YLL049W ARP3P47117 449 aaKnown RBP3.69□□□□□ -1.82
LDB18YLL049W SSU72P53538 206 aaPredicted RBP3.69□□□□□ -1.82
LDB18YLL049W IZH1Q03419 316 aa3.69□□□□□ -1.82
LDB18YLL049W YMR244WQ04018 355 aa3.69□□□□□ -1.82
LDB18YLL049W TRM10Q12400 293 aa3.69□□□□□ -1.82
LDB18YLL049W YOR011W-AQ3E807 68 aa3.69□□□□□ -1.82
LDB18YLL049W YJL197C-AP0C5P0 93 aa3.68□□□□□ -1.82
LDB18YLL049W CAP2P13517 287 aa3.68□□□□□ -1.82
LDB18YLL049W YCR001WP25347 104 aa3.68□□□□□ -1.82
LDB18YLL049W SNF11P38956 169 aa3.68□□□□□ -1.82
LDB18YLL049W SNU13P39990 126 aaKnown RBP3.68□□□□□ -1.82
LDB18YLL049W PDS1P40316 373 aaPredicted RBP3.68□□□□□ -1.82
LDB18YLL049W DFG10P40526 253 aa3.68□□□□□ -1.82
LDB18YLL049W OTU1P43558 301 aa3.68□□□□□ -1.82
LDB18YLL049W YJL027CP47063 138 aaPredicted RBP3.68□□□□□ -1.82
LDB18YLL049W YAE1P47118 141 aaPredicted RBP3.68□□□□□ -1.82
LDB18YLL049W VHT1P53241 593 aa3.68□□□□□ -1.82
LDB18YLL049W VBA1Q04301 562 aa3.68□□□□□ -1.82
LDB18YLL049W ATX2Q12067 313 aa3.68□□□□□ -1.82
LDB18YLL049W RIB7P33312 244 aa3.67□□□□□ -1.82
LDB18YLL049W RRT1P38192 103 aa3.67□□□□□ -1.82
LDB18YLL049W MIG3P39943 394 aa3.67□□□□□ -1.82
LDB18YLL049W YGR042WP53227 271 aa3.67□□□□□ -1.82
LDB18YLL049W SPO19Q03029 223 aa3.67□□□□□ -1.82
LDB18YLL049W LDS2Q08218 356 aa3.67□□□□□ -1.82
LDB18YLL049W MED4Q12343 284 aa3.67□□□□□ -1.82
LDB18YLL049W ANB1P19211 157 aa3.66□□□□□ -1.82
LDB18YLL049W POP5P28005 173 aa3.66□□□□□ -1.82
LDB18YLL049W TRR1P29509 319 aaKnown RBP3.66□□□□□ -1.82
LDB18YLL049W PCL6P40038 420 aa3.66□□□□□ -1.82
LDB18YLL049W GLE2P40066 365 aa3.66□□□□□ -1.82
LDB18YLL049W GPI2P46961 280 aa3.66□□□□□ -1.82
LDB18YLL049W VMA10P48836 114 aaKnown RBP3.66□□□□□ -1.82
LDB18YLL049W YGR025WP53216 100 aa3.66□□□□□ -1.82
LDB18YLL049W YIP3P53633 176 aa3.66□□□□□ -1.82
LDB18YLL049W GPI15P53961 229 aa3.66□□□□□ -1.82
LDB18YLL049W MRPS8Q03799 155 aa3.66□□□□□ -1.82
LDB18YLL049W PRM7Q12459 698 aa3.66□□□□□ -1.82
LDB18YLL049W YGL258W-AQ3E740 77 aa3.66□□□□□ -1.82
LDB18YLL049W YNL146C-AQ3E7Z1 64 aa3.66□□□□□ -1.82
LDB18YLL049W UBA3Q99344 299 aa3.66□□□□□ -1.82
LDB18YLL049W RPL42AP0CX27 106 aaKnown RBP3.65□□□□□ -1.83
LDB18YLL049W RPL42BP0CX28 106 aaKnown RBP3.65□□□□□ -1.83
LDB18YLL049W RPS18AP0CX55 146 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms