RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W ARO4P32449 370 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W APS1P35181 156 aa0.57□□□□□ -2.32
PRP16YKR086W YET1P35723 206 aa0.57□□□□□ -2.32
PRP16YKR086W VPS21P36017 210 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W PDX3P38075 228 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W SUR2P38992 349 aa0.57□□□□□ -2.32
PRP16YKR086W HAM1P47119 197 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W YNL010WP53981 241 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W UBC7Q02159 165 aa0.57□□□□□ -2.32
PRP16YKR086W YMR315WQ04869 349 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W SPC2Q04969 178 aa0.57□□□□□ -2.32
PRP16YKR086W YOL160WQ08321 113 aa0.57□□□□□ -2.32
PRP16YKR086W MSH5Q12175 901 aa0.57□□□□□ -2.32
PRP16YKR086W RPS23AP0CX29 145 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W RPS23BP0CX30 145 aa0.57□□□□□ -2.32
PRP16YKR086W FAR1P21268 830 aa0.57□□□□□ -2.32
PRP16YKR086W BET1P22804 142 aa0.57□□□□□ -2.32
PRP16YKR086W MEK1P24719 497 aaPredicted RBP0.57□□□□□ -2.32
PRP16YKR086W TRR1P29509 319 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W IKI1P38874 309 aa0.57□□□□□ -2.32
PRP16YKR086W GON7P46984 123 aa0.57□□□□□ -2.32
PRP16YKR086W COG5P53951 403 aa0.57□□□□□ -2.32
PRP16YKR086W YNL033WP53964 284 aa0.57□□□□□ -2.32
PRP16YKR086W YNL019CP53975 284 aa0.57□□□□□ -2.32
PRP16YKR086W ATP19P81451 68 aa0.57□□□□□ -2.32
PRP16YKR086W KRE28Q04431 385 aa0.57□□□□□ -2.32
PRP16YKR086W DCN1Q12395 269 aa0.57□□□□□ -2.32
PRP16YKR086W RIB3Q99258 208 aa0.57□□□□□ -2.32
PRP16YKR086W PET54P10834 293 aa0.57□□□□□ -2.32
PRP16YKR086W EHD3P28817 500 aa0.57□□□□□ -2.32
PRP16YKR086W AHT1P29589 182 aa0.57□□□□□ -2.32
PRP16YKR086W SHB17P36136 271 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W YHI9P38765 294 aa0.57□□□□□ -2.32
PRP16YKR086W YEA4P40004 342 aa0.57□□□□□ -2.32
PRP16YKR086W YER134CP40081 178 aa0.57□□□□□ -2.32
PRP16YKR086W YFL064CP43540 174 aa0.57□□□□□ -2.32
PRP16YKR086W JAC1P53193 184 aa0.57□□□□□ -2.32
PRP16YKR086W YGR042WP53227 271 aa0.57□□□□□ -2.32
PRP16YKR086W MPA43P53583 542 aaPredicted RBP0.57□□□□□ -2.32
PRP16YKR086W PDR17P53844 350 aa0.57□□□□□ -2.32
PRP16YKR086W SLM2P53955 656 aa0.57□□□□□ -2.32
PRP16YKR086W ERV25P54837 211 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W ACT1P60010 375 aaKnown RBP0.57□□□□□ -2.32
PRP16YKR086W VBA1Q04301 562 aa0.57□□□□□ -2.32
PRP16YKR086W SHH4Q06236 168 aa0.57□□□□□ -2.32
PRP16YKR086W RAD28Q12021 506 aa0.57□□□□□ -2.32
PRP16YKR086W YPR063CQ12160 140 aa0.57□□□□□ -2.32
PRP16YKR086W PRR2Q12310 699 aa0.57□□□□□ -2.32
PRP16YKR086W CSF1Q12150 2958 aa0.56□□□□□ -2.32
PRP16YKR086W PFY1P07274 126 aa0.56□□□□□ -2.32
PRP16YKR086W IDP1P21954 428 aaKnown RBP0.56□□□□□ -2.32
PRP16YKR086W PEX32P38292 413 aa0.56□□□□□ -2.32
PRP16YKR086W COS8P38723 381 aa0.56□□□□□ -2.32
PRP16YKR086W BMT5P40493 336 aa0.56□□□□□ -2.32
PRP16YKR086W YIL086CP40503 102 aa0.56□□□□□ -2.32
PRP16YKR086W HOC1P47124 396 aa0.56□□□□□ -2.32
PRP16YKR086W PRM8P53174 237 aa0.56□□□□□ -2.32
PRP16YKR086W EFM5P53200 248 aaKnown RBP0.56□□□□□ -2.32
PRP16YKR086W TAZ1Q06510 381 aa0.56□□□□□ -2.32
PRP16YKR086W PRP11Q07350 266 aaPredicted RBP0.56□□□□□ -2.32
PRP16YKR086W KTI11Q3E840 82 aa0.56□□□□□ -2.32
PRP16YKR086W NCB2Q92317 146 aa0.56□□□□□ -2.32
PRP16YKR086W CDC39P25655 2108 aaKnown RBP0.56□□□□□ -2.32
PRP16YKR086W MBF1O14467 151 aaKnown RBP0.56□□□□□ -2.32
PRP16YKR086W COX5BP00425 151 aa0.56□□□□□ -2.32
PRP16YKR086W MGT1P26188 188 aa0.56□□□□□ -2.32
PRP16YKR086W SRP21P32342 167 aa0.56□□□□□ -2.32
PRP16YKR086W FMP23P38231 175 aa0.56□□□□□ -2.32
PRP16YKR086W URA8P38627 578 aaPredicted RBP0.56□□□□□ -2.32
PRP16YKR086W YHL049CP38722 271 aa0.56□□□□□ -2.32
PRP16YKR086W ECM14P38836 430 aa0.56□□□□□ -2.32
PRP16YKR086W TEM1P38987 245 aa0.56□□□□□ -2.32
PRP16YKR086W GAA1P39012 614 aa0.56□□□□□ -2.32
PRP16YKR086W YER084WP40057 128 aa0.56□□□□□ -2.32
PRP16YKR086W YJR141WP47172 347 aaPredicted RBP0.56□□□□□ -2.32
PRP16YKR086W SRL4Q03085 281 aa0.56□□□□□ -2.32
PRP16YKR086W Q0297Q9ZZV8 51 aa0.56□□□□□ -2.32
PRP16YKR086W SEC4P07560 215 aaKnown RBP0.55□□□□□ -2.32
PRP16YKR086W URA5P13298 226 aaKnown RBP0.55□□□□□ -2.32
PRP16YKR086W SUI1P32911 108 aaKnown RBP0.55□□□□□ -2.32
PRP16YKR086W SNC2P33328 115 aa0.55□□□□□ -2.32
PRP16YKR086W YKL162CP36052 402 aa0.55□□□□□ -2.32
PRP16YKR086W MSA2P36157 363 aa0.55□□□□□ -2.32
PRP16YKR086W DER1P38307 211 aa0.55□□□□□ -2.32
PRP16YKR086W RTC3P38804 111 aaPredicted RBP0.55□□□□□ -2.32
PRP16YKR086W PET8P38921 284 aa0.55□□□□□ -2.32
PRP16YKR086W ERJ5P43613 295 aaPredicted RBP0.55□□□□□ -2.32
PRP16YKR086W AIF1P52923 378 aa0.55□□□□□ -2.32
PRP16YKR086W YGR050CP53231 118 aa0.55□□□□□ -2.32
PRP16YKR086W SMD1Q02260 146 aaPredicted RBP0.55□□□□□ -2.32
PRP16YKR086W KEI1Q06346 221 aa0.55□□□□□ -2.32
PRP16YKR086W YDL085C-AQ3E7B7 68 aaKnown RBP0.55□□□□□ -2.32
PRP16YKR086W YAL064W-BO13512 126 aa0.55□□□□□ -2.32
PRP16YKR086W SGA1P08019 549 aa0.55□□□□□ -2.32
PRP16YKR086W ANB1P19211 157 aa0.55□□□□□ -2.32
PRP16YKR086W HSP30P25619 332 aa0.55□□□□□ -2.32
PRP16YKR086W MDH3P32419 343 aaKnown RBP RIP-Chip data0.55□□□□□ -2.32not detected
PRP16YKR086W GSP2P32836 220 aaKnown RBP0.55□□□□□ -2.32
PRP16YKR086W CPR5P35176 225 aa0.55□□□□□ -2.32
PRP16YKR086W YHL005CP38752 130 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms