RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YCR023CP25351 611 aa3.09□□□□□ -1.91
YIR043CYIR043C CSH1P38287 376 aa3.09□□□□□ -1.91
YIR043CYIR043C NSA2P40078 261 aaKnown RBP3.09□□□□□ -1.91
YIR043CYIR043C ANT1Q06497 328 aa3.09□□□□□ -1.91
YIR043CYIR043C DAS2Q12084 232 aa3.09□□□□□ -1.91
YIR043CYIR043C NSL1Q12143 216 aa3.09□□□□□ -1.91
YIR043CYIR043C IDP1P21954 428 aaKnown RBP3.08□□□□□ -1.92
YIR043CYIR043C CPR5P35176 225 aa3.08□□□□□ -1.92
YIR043CYIR043C XPT1P47165 209 aa3.08□□□□□ -1.92
YIR043CYIR043C YDR476CQ03362 224 aa3.08□□□□□ -1.92
YIR043CYIR043C GAL83Q04739 417 aa3.08□□□□□ -1.92
YIR043CYIR043C STP22P25604 385 aa3.07□□□□□ -1.92
YIR043CYIR043C TIM13P53299 105 aa3.07□□□□□ -1.92
YIR043CYIR043C YNL033WP53964 284 aa3.07□□□□□ -1.92
YIR043CYIR043C THI74Q04083 370 aa3.07□□□□□ -1.92
YIR043CYIR043C YPL073CP40323 161 aa3.06□□□□□ -1.92
YIR043CYIR043C SBH2P52871 88 aa3.06□□□□□ -1.92
YIR043CYIR043C YGL101WP53144 215 aa3.06□□□□□ -1.92
YIR043CYIR043C ATP20Q12233 115 aa3.06□□□□□ -1.92
YIR043CYIR043C YOR214CQ12282 236 aa3.06□□□□□ -1.92
YIR043CYIR043C TMA19P35691 167 aaKnown RBP3.05□□□□□ -1.92
YIR043CYIR043C YBR219CP38317 127 aa3.05□□□□□ -1.92
YIR043CYIR043C VPS28Q02767 242 aa3.05□□□□□ -1.92
YIR043CYIR043C YPR127WQ06494 345 aa3.05□□□□□ -1.92
YIR043CYIR043C YPR174CQ06616 221 aaPredicted RBP3.05□□□□□ -1.92
YIR043CYIR043C YKR045CP36138 183 aa3.04□□□□□ -1.92
YIR043CYIR043C FYV4P38783 130 aaPredicted RBP3.04□□□□□ -1.92
YIR043CYIR043C YPR013CQ12145 317 aa3.04□□□□□ -1.92
YIR043CYIR043C PET20Q99373 253 aa3.04□□□□□ -1.92
YIR043CYIR043C BUB2P26448 306 aaPredicted RBP3.03□□□□□ -1.92
YIR043CYIR043C YNL200CP40165 246 aaKnown RBP3.03□□□□□ -1.92
YIR043CYIR043C RNH202Q05635 350 aa3.03□□□□□ -1.92
YIR043CYIR043C FAS1P07149 2051 aaKnown RBP3.03□□□□□ -1.92
YIR043CYIR043C PHO85P17157 305 aa3.02□□□□□ -1.93
YIR043CYIR043C HSP30P25619 332 aa3.02□□□□□ -1.93
YIR043CYIR043C YBR220CP38318 560 aa3.02□□□□□ -1.93
YIR043CYIR043C SLM6P38343 150 aa3.02□□□□□ -1.93
YIR043CYIR043C YKR005CQ02203 525 aa3.02□□□□□ -1.93
YIR043CYIR043C PRP11Q07350 266 aaPredicted RBP3.02□□□□□ -1.93
YIR043CYIR043C YPR202WQ08993 238 aa3.02□□□□□ -1.93
YIR043CYIR043C UBI4P0CG63 381 aaKnown RBP3.01□□□□□ -1.93
YIR043CYIR043C NUF2P33895 451 aa3.01□□□□□ -1.93
YIR043CYIR043C RRT1P38192 103 aa3.01□□□□□ -1.93
YIR043CYIR043C GLR1P41921 483 aaKnown RBP3□□□□□ -1.93
YIR043CYIR043C LSM3P57743 89 aaKnown RBP3□□□□□ -1.93
YIR043CYIR043C EFG1Q3E705 233 aaKnown RBP3□□□□□ -1.93
YIR043CYIR043C RAD6P06104 172 aa2.99□□□□□ -1.93
YIR043CYIR043C PEX34P25584 144 aa2.99□□□□□ -1.93
YIR043CYIR043C YHL018WP38744 120 aaPredicted RBP2.99□□□□□ -1.93
YIR043CYIR043C YLR162WQ06235 118 aa2.99□□□□□ -1.93
YIR043CYIR043C CSI2Q08054 341 aa2.99□□□□□ -1.93
YIR043CYIR043C YLR422WQ06409 1932 aa2.99□□□□□ -1.93
YIR043CYIR043C MSB2P32334 1306 aa2.98□□□□□ -1.93
YIR043CYIR043C RPL2AP0CX45 254 aaKnown RBP2.98□□□□□ -1.93
YIR043CYIR043C RPL2BP0CX46 254 aaKnown RBP2.98□□□□□ -1.93
YIR043CYIR043C ORM1P53224 222 aa2.98□□□□□ -1.93
YIR043CYIR043C YHR007C-AQ07074 71 aa2.98□□□□□ -1.93
YIR043CYIR043C COX8P04039 78 aa2.97□□□□□ -1.93
YIR043CYIR043C PBI2P0CT04 75 aaKnown RBP2.97□□□□□ -1.93
YIR043CYIR043C GSP2P32836 220 aaKnown RBP2.97□□□□□ -1.93
YIR043CYIR043C SFK1P35735 353 aa2.97□□□□□ -1.93
YIR043CYIR043C RIO2P40160 425 aaKnown RBP2.97□□□□□ -1.93
YIR043CYIR043C DAD4P69851 72 aa2.97□□□□□ -1.93
YIR043CYIR043C GRX5Q02784 150 aa2.97□□□□□ -1.93
YIR043CYIR043C PIR1Q03178 341 aa2.97□□□□□ -1.93
YIR043CYIR043C TRM3Q07527 1436 aa2.96□□□□□ -1.94
YIR043CYIR043C YER135CP40082 130 aa2.96□□□□□ -1.94
YIR043CYIR043C NQM1P53228 333 aaPredicted RBP2.96□□□□□ -1.94
YIR043CYIR043C YLR046CQ12253 270 aa2.96□□□□□ -1.94
YIR043CYIR043C MDM35O60200 86 aa2.95□□□□□ -1.94
YIR043CYIR043C PTC1P35182 281 aa2.95□□□□□ -1.94
YIR043CYIR043C YEL028WP39989 153 aa2.95□□□□□ -1.94
YIR043CYIR043C APQ12P40532 138 aa2.95□□□□□ -1.94
YIR043CYIR043C THG1P53215 237 aaKnown RBP2.95□□□□□ -1.94
YIR043CYIR043C FIT2Q08906 153 aa2.95□□□□□ -1.94
YIR043CYIR043C QCR8P08525 94 aa2.94□□□□□ -1.94
YIR043CYIR043C RPL30P14120 105 aaKnown RBP2.94□□□□□ -1.94
YIR043CYIR043C DLS1P40366 167 aa2.94□□□□□ -1.94
YIR043CYIR043C YOR015WQ12169 119 aa2.94□□□□□ -1.94
YIR043CYIR043C CYR1P08678 2026 aaKnown RBP2.93□□□□□ -1.94
YIR043CYIR043C ATP5P09457 212 aa2.93□□□□□ -1.94
YIR043CYIR043C PET54P10834 293 aa2.93□□□□□ -1.94
YIR043CYIR043C SRP102P36057 244 aaPredicted RBP2.93□□□□□ -1.94
YIR043CYIR043C BAT2P47176 376 aaKnown RBP2.93□□□□□ -1.94
YIR043CYIR043C HHT1P61830 136 aa2.93□□□□□ -1.94
YIR043CYIR043C SYM1Q06563 197 aa2.93□□□□□ -1.94
YIR043CYIR043C PST2Q12335 198 aaKnown RBP2.93□□□□□ -1.94
YIR043CYIR043C YOR381W-AQ3E804 55 aa2.93□□□□□ -1.94
YIR043CYIR043C YOL162WP0CF19 215 aa2.92□□□□□ -1.94
YIR043CYIR043C RPL13BP40212 199 aaKnown RBP2.92□□□□□ -1.94
YIR043CYIR043C RIM9Q04734 239 aa2.92□□□□□ -1.94
YIR043CYIR043C RPL13AQ12690 199 aaPredicted RBP2.92□□□□□ -1.94
YIR043CYIR043C GPA2P10823 449 aa2.91□□□□□ -1.94
YIR043CYIR043C DML1Q03652 475 aa2.91□□□□□ -1.94
YIR043CYIR043C DUR1,2P32528 1835 aaKnown RBP2.91□□□□□ -1.94
YIR043CYIR043C YGL010WP25338 174 aa2.9□□□□□ -1.95
YIR043CYIR043C YEL073CP39974 107 aa2.9□□□□□ -1.95
YIR043CYIR043C UPS3Q04006 179 aa2.9□□□□□ -1.95
YIR043CYIR043C UPS1Q05776 175 aa2.9□□□□□ -1.95
YIR043CYIR043C ATG41Q12048 136 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms