RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C USV1Q12132 391 aa10.15□□□□□ -0.78
SHU1YHL006C RTC3P38804 111 aaPredicted RBP10.14□□□□□ -0.79
SHU1YHL006C HXT14P42833 540 aa10.14□□□□□ -0.79
SHU1YHL006C YGR018CP53211 109 aa10.14□□□□□ -0.79
SHU1YHL006C DCS1Q06151 350 aa10.14□□□□□ -0.79
SHU1YHL006C ATG39Q06159 398 aa10.14□□□□□ -0.79
SHU1YHL006C RRT7Q07829 113 aa10.14□□□□□ -0.79
SHU1YHL006C YCR022CP25620 114 aa10.13□□□□□ -0.79
SHU1YHL006C TIP1P27654 210 aaPredicted RBP10.13□□□□□ -0.79
SHU1YHL006C YAP1802P53309 568 aa10.13□□□□□ -0.79
SHU1YHL006C YMR090WQ04304 227 aaKnown RBP10.13□□□□□ -0.79
SHU1YHL006C SCW10Q04951 389 aa10.13□□□□□ -0.79
SHU1YHL006C FCY2P17064 533 aa10.12□□□□□ -0.79
SHU1YHL006C BDH1P39714 382 aa10.12□□□□□ -0.79
SHU1YHL006C RPL13BP40212 199 aaKnown RBP10.12□□□□□ -0.79
SHU1YHL006C TRI1Q05024 226 aa10.12□□□□□ -0.79
SHU1YHL006C RPL13AQ12690 199 aaPredicted RBP10.12□□□□□ -0.79
SHU1YHL006C MST28P39552 234 aa10.11□□□□□ -0.79
SHU1YHL006C POR2P40478 281 aa10.11□□□□□ -0.79
SHU1YHL006C YJL027CP47063 138 aaPredicted RBP10.11□□□□□ -0.79
SHU1YHL006C MST27P53176 234 aa10.11□□□□□ -0.79
SHU1YHL006C GPI15P53961 229 aa10.11□□□□□ -0.79
SHU1YHL006C POS5Q06892 414 aa10.11□□□□□ -0.79
SHU1YHL006C POP5P28005 173 aa10.1□□□□□ -0.79
SHU1YHL006C AVT5P38176 459 aa10.1□□□□□ -0.79
SHU1YHL006C SIM1P40472 476 aa10.1□□□□□ -0.79
SHU1YHL006C AGX1P43567 385 aa10.1□□□□□ -0.79
SHU1YHL006C PDR17P53844 350 aa10.1□□□□□ -0.79
SHU1YHL006C CSH1P38287 376 aa10.09□□□□□ -0.79
SHU1YHL006C OCA2P53949 197 aa10.09□□□□□ -0.79
SHU1YHL006C RRG8Q06109 277 aa10.09□□□□□ -0.79
SHU1YHL006C PIS1P06197 220 aaKnown RBP10.08□□□□□ -0.8
SHU1YHL006C YLR146W-AQ2V2P1 62 aa10.08□□□□□ -0.8
SHU1YHL006C RPS25BP0C0T4 108 aaKnown RBP10.07□□□□□ -0.8
SHU1YHL006C NRG2P38082 220 aa10.07□□□□□ -0.8
SHU1YHL006C SLM6P38343 150 aa10.07□□□□□ -0.8
SHU1YHL006C YEA6P39953 335 aa10.07□□□□□ -0.8
SHU1YHL006C TDA4P47153 279 aa10.07□□□□□ -0.8
SHU1YHL006C PKP2P53170 491 aa10.07□□□□□ -0.8
SHU1YHL006C LST7P53237 242 aa10.07□□□□□ -0.8
SHU1YHL006C GEP3Q08622 556 aa10.07□□□□□ -0.8
SHU1YHL006C AGC1Q12482 902 aa10.07□□□□□ -0.8
SHU1YHL006C RPS25AQ3E792 108 aaPredicted RBP10.07□□□□□ -0.8
SHU1YHL006C FPR2P32472 135 aa10.06□□□□□ -0.8
SHU1YHL006C GLE2P40066 365 aa10.06□□□□□ -0.8
SHU1YHL006C RTS2P40962 232 aa10.06□□□□□ -0.8
SHU1YHL006C YJR015WP47090 510 aa10.06□□□□□ -0.8
SHU1YHL006C ERP1Q05359 219 aaKnown RBP10.06□□□□□ -0.8
SHU1YHL006C POM34Q12445 299 aa10.06□□□□□ -0.8
SHU1YHL006C PPQ1P32945 549 aa10.05□□□□□ -0.8
SHU1YHL006C SRL3P36167 246 aa10.05□□□□□ -0.8
SHU1YHL006C ALG13P53178 202 aa10.05□□□□□ -0.8
SHU1YHL006C YHR213WP0CI67 198 aa10.04□□□□□ -0.8
SHU1YHL006C YCR025CP25352 136 aa10.04□□□□□ -0.8
SHU1YHL006C CAF16P43569 289 aa10.04□□□□□ -0.8
SHU1YHL006C TIM44Q01852 431 aa10.04□□□□□ -0.8
SHU1YHL006C YMR082CQ04276 118 aa10.04□□□□□ -0.8
SHU1YHL006C LDS2Q08218 356 aa10.04□□□□□ -0.8
SHU1YHL006C ISN1Q99312 450 aa10.04□□□□□ -0.8
SHU1YHL006C YMR316C-AI2HB70 103 aa10.03□□□□□ -0.8
SHU1YHL006C CDC7P06243 507 aa10.03□□□□□ -0.8
SHU1YHL006C RRF1P38771 230 aa10.03□□□□□ -0.8
SHU1YHL006C MIC26P50087 233 aa10.03□□□□□ -0.8
SHU1YHL006C FYV6P53913 173 aa10.03□□□□□ -0.8
SHU1YHL006C SNF11P38956 169 aa10.02□□□□□ -0.81
SHU1YHL006C YGR269WP40326 108 aa10.02□□□□□ -0.81
SHU1YHL006C YHR213W-AQ8TGT4 77 aa10.02□□□□□ -0.81
SHU1YHL006C SIP1P32578 815 aa10.01□□□□□ -0.81
SHU1YHL006C NPL6P32832 435 aa10.01□□□□□ -0.81
SHU1YHL006C PNC1P53184 216 aaKnown RBP10.01□□□□□ -0.81
SHU1YHL006C YGR025WP53216 100 aa10.01□□□□□ -0.81
SHU1YHL006C CKS1P20486 150 aaKnown RBP10□□□□□ -0.81
SHU1YHL006C IMP2P46972 177 aa10□□□□□ -0.81
SHU1YHL006C YJR111CP47148 283 aaKnown RBP10□□□□□ -0.81
SHU1YHL006C SDH7Q04401 133 aa10□□□□□ -0.81
SHU1YHL006C PRR2Q12310 699 aa10□□□□□ -0.81
SHU1YHL006C YOR011W-AQ3E807 68 aa10□□□□□ -0.81
SHU1YHL006C HST4P53688 370 aa9.99□□□□□ -0.81
SHU1YHL006C DID2P69771 204 aa9.99□□□□□ -0.81
SHU1YHL006C ARR3Q06598 404 aa9.99□□□□□ -0.81
SHU1YHL006C UPS2P35200 230 aa9.98□□□□□ -0.81
SHU1YHL006C SWM2P40342 146 aa9.98□□□□□ -0.81
SHU1YHL006C LCB3P47013 409 aa9.98□□□□□ -0.81
SHU1YHL006C ODC1Q03028 310 aa9.98□□□□□ -0.81
SHU1YHL006C DFR1P07807 211 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
SHU1YHL006C ERS1P17261 260 aa9.97□□□□□ -0.81
SHU1YHL006C PRE9P23638 258 aaKnown RBP9.97□□□□□ -0.81
SHU1YHL006C ACB1P31787 87 aa9.97□□□□□ -0.81
SHU1YHL006C SHB17P36136 271 aaKnown RBP9.97□□□□□ -0.81
SHU1YHL006C GPI2P46961 280 aa9.97□□□□□ -0.81
SHU1YHL006C ATG27P46989 271 aa9.97□□□□□ -0.81
SHU1YHL006C BOR1P53838 576 aa9.97□□□□□ -0.81
SHU1YHL006C RDS3Q06835 107 aaPredicted RBP9.97□□□□□ -0.81
SHU1YHL006C SCM3Q12334 223 aa9.97□□□□□ -0.81
SHU1YHL006C MLF3P32047 452 aa9.96□□□□□ -0.82
SHU1YHL006C CMC1P36064 111 aa9.96□□□□□ -0.82
SHU1YHL006C MIC27P50945 234 aa9.96□□□□□ -0.82
SHU1YHL006C COX12Q01519 83 aa9.96□□□□□ -0.82
SHU1YHL006C SHH3Q04487 196 aa9.96□□□□□ -0.82
SHU1YHL006C AYT1Q12226 474 aa9.96□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 104.9 ms