RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W OCA6Q12454 224 aa2.86□□□□□ -1.95
CAF130YGR134W YCL021W-AQ96VH3 125 aa2.86□□□□□ -1.95
CAF130YGR134W MRPL17P36528 281 aa2.85□□□□□ -1.95
CAF130YGR134W YER181CP40097 107 aa2.85□□□□□ -1.95
CAF130YGR134W YFL019CP43576 117 aa2.85□□□□□ -1.95
CAF130YGR134W COG7P53195 279 aa2.85□□□□□ -1.95
CAF130YGR134W YPL278CQ08990 100 aa2.85□□□□□ -1.95
CAF130YGR134W PSF1Q12488 208 aa2.85□□□□□ -1.95
CAF130YGR134W YLR462WO13556 202 aa2.85□□□□□ -1.95
CAF130YGR134W SIR2P06700 562 aa2.85□□□□□ -1.95
CAF130YGR134W LDS1P31379 325 aa2.85□□□□□ -1.95
CAF130YGR134W MSA2P36157 363 aa2.85□□□□□ -1.95
CAF130YGR134W MRPL39P36533 70 aa2.85□□□□□ -1.95
CAF130YGR134W YEL075CP39972 122 aa2.85□□□□□ -1.95
CAF130YGR134W EAF6P47128 113 aa2.85□□□□□ -1.95
CAF130YGR134W VPS71Q03433 280 aa2.85□□□□□ -1.95
CAF130YGR134W CGI121Q03705 181 aaKnown RBP2.85□□□□□ -1.95
CAF130YGR134W TVP18Q04767 167 aa2.85□□□□□ -1.95
CAF130YGR134W MCH1Q07376 486 aa2.85□□□□□ -1.95
CAF130YGR134W ATP14Q12349 124 aa2.85□□□□□ -1.95
CAF130YGR134W SHB17P36136 271 aaKnown RBP2.84□□□□□ -1.95
CAF130YGR134W SRL3P36167 246 aa2.84□□□□□ -1.95
CAF130YGR134W COS8P38723 381 aa2.84□□□□□ -1.95
CAF130YGR134W YFR054CP43622 192 aa2.84□□□□□ -1.95
CAF130YGR134W OSH6Q02201 448 aa2.84□□□□□ -1.95
CAF130YGR134W SDH7Q04401 133 aa2.84□□□□□ -1.95
CAF130YGR134W NUM1Q00402 2748 aa2.84□□□□□ -1.95
CAF130YGR134W YPR117WQ06116 2489 aa2.84□□□□□ -1.95
CAF130YGR134W GPA2P10823 449 aa2.84□□□□□ -1.95
CAF130YGR134W VTC1P40046 129 aaRIP-Chip data2.84□□□□□ -1.95 RIP-Chip
CAF130YGR134W SYS1P41544 203 aa2.84□□□□□ -1.95
CAF130YGR134W MEP2P41948 499 aa2.84□□□□□ -1.95
CAF130YGR134W SNO3P43544 222 aa2.84□□□□□ -1.95
CAF130YGR134W XPT1P47165 209 aa2.84□□□□□ -1.95
CAF130YGR134W YNR062CP53748 327 aa2.84□□□□□ -1.95
CAF130YGR134W FMP42Q04991 504 aa2.84□□□□□ -1.95
CAF130YGR134W YLR042CQ07990 161 aa2.84□□□□□ -1.95
CAF130YGR134W DFM1Q12743 341 aaKnown RBP2.84□□□□□ -1.95
CAF130YGR134W CKS1P20486 150 aaKnown RBP2.84□□□□□ -1.96
CAF130YGR134W RPC19P28000 142 aaKnown RBP2.84□□□□□ -1.96
CAF130YGR134W YJL028WP47062 111 aa2.84□□□□□ -1.96
CAF130YGR134W YDR102CQ03864 110 aa2.84□□□□□ -1.96
CAF130YGR134W TFC7Q12415 435 aa2.84□□□□□ -1.96
CAF130YGR134W HIS3P06633 220 aa2.83□□□□□ -1.96
CAF130YGR134W PCL1P24867 279 aa2.83□□□□□ -1.96
CAF130YGR134W MED6P38782 295 aa2.83□□□□□ -1.96
CAF130YGR134W VMA7P39111 118 aa2.83□□□□□ -1.96
CAF130YGR134W YJL218WP40892 196 aaKnown RBP2.83□□□□□ -1.96
CAF130YGR134W SCS3P53012 380 aa2.83□□□□□ -1.96
CAF130YGR134W CNL1Q06333 122 aa2.83□□□□□ -1.96
CAF130YGR134W YBL008W-AQ3E821 79 aa2.83□□□□□ -1.96
CAF130YGR134W SHE2P36068 246 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
CAF130YGR134W PAN3P36102 679 aaPredicted RBP2.83□□□□□ -1.96
CAF130YGR134W GGC1P38988 300 aa2.83□□□□□ -1.96
CAF130YGR134W YGR018CP53211 109 aa2.83□□□□□ -1.96
CAF130YGR134W FSH2Q05015 223 aa2.83□□□□□ -1.96
CAF130YGR134W TDA8Q6B2U8 126 aa2.83□□□□□ -1.96
CAF130YGR134W LAA1P39526 2014 aa2.83□□□□□ -1.96
CAF130YGR134W BUD23P25627 275 aaPredicted RBP2.83□□□□□ -1.96
CAF130YGR134W RPS20P38701 121 aaKnown RBP2.83□□□□□ -1.96
CAF130YGR134W AVT1P47082 602 aa2.83□□□□□ -1.96
CAF130YGR134W PLP1Q04004 230 aa2.83□□□□□ -1.96
CAF130YGR134W TSC3Q3E790 80 aa2.83□□□□□ -1.96
CAF130YGR134W YMR316C-AI2HB70 103 aa2.82□□□□□ -1.96
CAF130YGR134W HHF1P02309 103 aaKnown RBP2.82□□□□□ -1.96
CAF130YGR134W ATG22P25568 528 aa2.82□□□□□ -1.96
CAF130YGR134W FCF1Q05498 189 aaPredicted RBP2.82□□□□□ -1.96
CAF130YGR134W YPL162CQ12042 273 aa2.82□□□□□ -1.96
CAF130YGR134W SLO1Q3E784 85 aa2.82□□□□□ -1.96
CAF130YGR134W OMA1P36163 345 aa2.82□□□□□ -1.96
CAF130YGR134W CLD1P53264 445 aa2.82□□□□□ -1.96
CAF130YGR134W YOR376W-AQ3E805 51 aa2.82□□□□□ -1.96
CAF130YGR134W ACC1Q00955 2233 aaKnown RBP2.82□□□□□ -1.96
CAF130YGR134W PHO85P17157 305 aa2.81□□□□□ -1.96
CAF130YGR134W YCR043CP25361 127 aa2.81□□□□□ -1.96
CAF130YGR134W PEX34P25584 144 aa2.81□□□□□ -1.96
CAF130YGR134W ERG2P32352 222 aa2.81□□□□□ -1.96
CAF130YGR134W TFC1P32367 649 aa2.81□□□□□ -1.96
CAF130YGR134W POP4P38336 279 aa2.81□□□□□ -1.96
CAF130YGR134W RPE1P46969 238 aa2.81□□□□□ -1.96
CAF130YGR134W HHO1P53551 258 aa2.81□□□□□ -1.96
CAF130YGR134W GOT1Q03554 138 aa2.81□□□□□ -1.96
CAF130YGR134W RAV2Q03956 351 aa2.81□□□□□ -1.96
CAF130YGR134W SUE1Q06524 206 aa2.81□□□□□ -1.96
CAF130YGR134W YOR289WQ12012 251 aaPredicted RBP2.81□□□□□ -1.96
CAF130YGR134W GEP5Q12393 293 aa2.81□□□□□ -1.96
CAF130YGR134W PRY2P36110 329 aa2.81□□□□□ -1.96
CAF130YGR134W FIS1P40515 155 aa2.81□□□□□ -1.96
CAF130YGR134W MAK3Q03503 176 aa2.81□□□□□ -1.96
CAF130YGR134W JID1Q12350 301 aa2.81□□□□□ -1.96
CAF130YGR134W NAG1Q8TGN9 163 aa2.81□□□□□ -1.96
CAF130YGR134W UBR2Q07963 1872 aa2.81□□□□□ -1.96
CAF130YGR134W PRE7P23724 241 aaKnown RBP2.81□□□□□ -1.96
CAF130YGR134W AVT6P40074 448 aa2.81□□□□□ -1.96
CAF130YGR134W SFT1P43682 97 aa2.81□□□□□ -1.96
CAF130YGR134W GAS3Q03655 524 aa2.81□□□□□ -1.96
CAF130YGR134W RRG7Q08774 242 aaPredicted RBP2.81□□□□□ -1.96
CAF130YGR134W IMP1P28627 190 aa2.8□□□□□ -1.96
CAF130YGR134W FCY21P40039 528 aa2.8□□□□□ -1.96
CAF130YGR134W IZH2Q12442 317 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms